RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 GBF1Q92538 1859 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 TMEM265A0A087WTH1 108 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 PNMA6FA0A0J9YX94 578 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 GH1P01241 217 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 SUPT20HL2P0C7V6 817 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 EIF2AK2P19525 551 aaKnown RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 PTPN11Q06124 597 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 LY6KQ17RY6 165 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 NFRKBQ6P4R8 1299 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 SEPT14Q6ZU15 432 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 HOMER1Q86YM7 354 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 PIGSQ96S52 555 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 MAP3K14Q99558 947 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 TTYH1Q9H313 450 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 BRPF3Q9ULD4 1205 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 TRANK1O15050 2925 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 UMODL1Q5DID0 1318 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 TANC1Q9C0D5 1861 aa9.49□□□□□ -0.89
TRIM43CP-201ENST00000422468 TRIP12Q14669 1992 aaPredicted RBP9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 POTEMA6NI47 508 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 SH2B2O14492 632 aaPredicted RBP9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 DPYSL4O14531 572 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 FGBP02675 491 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 NR3C2P08235 984 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 ACRP10323 421 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 RXRAP19793 462 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 DNAJB2P25686 324 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 HSPA4P34932 840 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 CCL23P55773 120 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 ARHGAP1Q07960 439 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 FAM47CQ5HY64 1035 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 AFG1LQ8WV93 481 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 HERVK_113Q902F9 699 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 EMID1Q96A84 441 aaPredicted RBP9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 WNT8AQ9H1J5 351 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 TRMT13Q9NUP7 481 aaKnown RBP9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 CHD7Q9P2D1 2997 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 SNX14Q9Y5W7 946 aa9.48□□□□□ -0.89
TRIM43CP-201ENST00000422468 CUL9Q8IWT3 2517 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 GCOM1H8Y6P7 765 aaPredicted RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 PRC1O43663 620 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 DDAH1O94760 285 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 PLEKHA8P1O95397 391 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 MMP3P08254 477 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 POLR2MP0CAP2 368 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 CYP2C9P11712 490 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 MYCLP12524 364 aaPredicted RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 CASTP20810 708 aaKnown RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 HOXA13P31271 388 aaPredicted RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 KIF5BP33176 963 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 MCM5P33992 734 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 FUT2Q10981 343 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 TSGA10IPQ3SY00 556 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 KCNV1Q6PIU1 500 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 CASC1Q6TDU7 716 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 VSIG10LQ86VR7 867 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 ZNF654Q8IZM8 581 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 CMTR1Q8N1G2 835 aaKnown RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 CTCFLQ8NI51 663 aaPredicted RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 TMEM87BQ96K49 555 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 PDCD2LQ9BRP1 358 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 USP26Q9BXU7 913 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 MTIF3Q9H2K0 278 aaKnown RBP9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 MRVI1Q9Y6F6 885 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 DOCK5Q9H7D0 1870 aa9.47□□□□□ -0.89
TRIM43CP-201ENST00000422468 RGS20O76081 388 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 PFKMP08237 780 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 SMARCA1P28370 1054 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 CCND2P30279 289 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 RFC2P35250 354 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 LIFRP42702 1097 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 CHMP4BP1P59074 171 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 PGM5Q15124 567 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 DGKDQ16760 1214 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 SESTD1Q86VW0 696 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 DHX37Q8IY37 1157 aaKnown RBP9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 PPTC7Q8NI37 304 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 PPP1R13LQ8WUF5 828 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 MYLIPQ8WY64 445 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 TIFAQ96CG3 184 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 RRP36Q96EU6 259 aaKnown RBP9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 SCLYQ96I15 445 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 LZTS2Q9BRK4 669 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 SPZ1Q9BXG8 430 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms