RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 YARSP54577 528 aaKnown RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 ST3GAL1Q11201 340 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 SCYL3Q8IZE3 742 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 NELFBQ8WX92 580 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 MMP19Q99542 508 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 SRRTQ9BXP5 876 aaKnown RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 TAB2Q9NYJ8 693 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 U2AF2P26368 475 aaKnown RBP eCLIP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 KRT9P35527 623 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 FAM193AP78312 1265 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 LRMPQ12912 555 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 MTMR1Q13613 665 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 AK8Q96MA6 479 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 TEX13BQ9BXU2 312 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 GPRC5DQ9NZD1 345 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 COL22A1Q8NFW1 1626 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 STXBP3O00186 592 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 MYL3P08590 195 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 CYP2B6P20813 491 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 NTRK3Q16288 839 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 POTEDQ86YR6 584 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 POMGNT1Q8WZA1 660 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 NACC1Q96RE7 527 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 MAP3K14Q99558 947 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 ZSWIM4Q9H7M6 989 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 ADM5C9JUS6 153 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 H0YCG3 227 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 FOXP2O15409 715 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 SLFN14P0C7P3 912 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 TFDP1Q14186 410 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 ARL6IP4Q66PJ3 421 aaKnown RBP10.75□□□□□ -0.69
CMSS1-201ENST00000421999 FAM170AA1A519 330 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 ERLIN1O75477 346 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 FDX1P10109 184 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 EVCP57679 992 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PPP2R5AQ15172 486 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 NLRP4Q96MN2 994 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 RIC8AQ9NPQ8 531 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 CRYBG1Q9Y4K1 1723 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 ABCB11O95342 1321 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PLCG1P19174 1290 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 HLTFQ14527 1009 aaKnown RBP eCLIP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 SMC1AQ14683 1233 aaKnown RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 TEX35Q5T0J7 233 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 MFSD14CQ5VZR4 134 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 NLRP7Q8WX94 980 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 MMS19Q96T76 1030 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 NFKBIEO00221 500 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 COBLO75128 1261 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PSAPP07602 524 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 SRGAP2CP0DJJ0 459 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 ARHGAP44Q17R89 818 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 KIFAP3Q92845 792 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 RNF34Q969K3 372 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 ATG4CQ96DT6 458 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 NOX5Q96PH1 765 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 PARK7Q99497 189 aaKnown RBP10.74□□□□□ -0.69
CMSS1-201ENST00000421999 ZFYVE28Q9HCC9 887 aa10.74□□□□□ -0.69
CMSS1-201ENST00000421999 RPN1P04843 607 aaKnown RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 RFX1P22670 979 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 IGSF22Q8N9C0 903 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 PARP2Q9UGN5 583 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 TNFAIP3P21580 790 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 CASP1P29466 404 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 MCM6Q14566 821 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 GOLPH3LQ9H4A5 285 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 ARMCX3Q9UH62 379 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 LRFN2Q9ULH4 789 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 TMX2Q9Y320 296 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 LMAN1P49257 510 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 MMP14P50281 582 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 DPCR1Q3MIW9 517 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 BHMT2Q9H2M3 363 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-201ENST00000421999 ITGB4P16144 1822 aa10.73□□□□□ -0.69
CMSS1-201ENST00000421999 CETPP11597 493 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms