RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LMO7Q8WWI1 1683 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 COL5A2P05997 1499 aaPredicted RBP7.12□□□□□ -1.27
SFXN1-202ENST00000421887 IRS2Q9Y4H2 1338 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 P4HBP07237 508 aaKnown RBP7.12□□□□□ -1.27
SFXN1-202ENST00000421887 RLBP1P12271 317 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 RNF4P78317 190 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 CBX2Q14781 532 aaPredicted RBP7.12□□□□□ -1.27
SFXN1-202ENST00000421887 VWA3BQ502W6 1294 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 MEI1Q5TIA1 1274 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 NLGN2Q8NFZ4 835 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 FNIP1Q8TF40 1166 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 CDADC1Q9BWV3 514 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 PODXL2Q9NZ53 605 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 DUSP10Q9Y6W6 482 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 WNK3Q9BYP7 1800 aa7.12□□□□□ -1.27
SFXN1-202ENST00000421887 BCL9O00512 1426 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 CPDO75976 1380 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 AATKQ6ZMQ8 1374 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 PRR36Q9H6K5 1346 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 F6X3S4 739 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 EXOC5O00471 708 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 DNAJA2O60884 412 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 HTR3BO95264 441 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 PRAMEF1O95521 474 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 MSL3P1P0C860 447 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 PMF1-BGLAPU3KQ54 211 aa7.11□□□□□ -1.27
SFXN1-202ENST00000421887 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQ27 194 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQ64 194 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQC6 194 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 MEIS1O00470 390 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 GCP02774 474 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
SFXN1-202ENST00000421887 MAPKAPK2P49137 400 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 HMGA2P52926 109 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 FOXO4P98177 505 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 TARBP2Q15633 366 aaKnown RBP7.1□□□□□ -1.27
SFXN1-202ENST00000421887 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 SLCO6A1Q86UG4 719 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 PHC3Q8NDX5 983 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 SORCS2Q96PQ0 1159 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 TFCP2L1Q9NZI6 479 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 IMPACTQ9P2X3 320 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 ACSL6Q9UKU0 697 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 AK5Q9Y6K8 562 aa7.1□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
SFXN1-202ENST00000421887 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 FAM221AA4D161 298 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 RGS13O14921 159 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 TOMM70O94826 608 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 F13A1P00488 732 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 NR1I3Q14994 352 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 CCDC84Q86UT8 332 aaPredicted RBP7.09□□□□□ -1.27
SFXN1-202ENST00000421887 GATAD2BQ8WXI9 593 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
SFXN1-202ENST00000421887 PRDM14Q9GZV8 571 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 ERVK13-1Q9NX77 482 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 GNEQ9Y223 722 aaKnown RBP7.09□□□□□ -1.27
SFXN1-202ENST00000421887 FAN1Q9Y2M0 1017 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 WDR90Q96KV7 1748 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 NHSQ6T4R5 1651 aa7.09□□□□□ -1.27
SFXN1-202ENST00000421887 SPATA31E1Q6ZUB1 1445 aa7.09□□□□□ -1.28
SFXN1-202ENST00000421887 BRD4O60885 1362 aaPredicted RBP7.08□□□□□ -1.28
SFXN1-202ENST00000421887 BTAF1O14981 1849 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 COL24A1Q17RW2 1714 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 UBOX5O94941 541 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 ITGB3P05106 788 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 PDE4CQ08493 712 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 CPZQ66K79 652 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 DNAJC5GQ8N7S2 189 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 ARID3AQ99856 593 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
SFXN1-202ENST00000421887 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
SFXN1-202ENST00000421887 PAPPAQ13219 1627 aa7.08□□□□□ -1.28
SFXN1-202ENST00000421887 ACEP12821 1306 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 WDR17Q8IZU2 1322 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 SIGLEC6O43699 453 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 RAG1P15918 1043 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 CAMK2GQ13555 558 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-202ENST00000421887 NBPF12Q5TAG4 269 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-202ENST00000421887 C16orf71Q8IYS4 520 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-202ENST00000421887 JMJD8Q96S16 334 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 HCFC2Q9Y5Z7 792 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 ARHGEF28Q8N1W1 1705 aaKnown RBP7.07□□□□□ -1.28
SFXN1-202ENST00000421887 ADCY9O60503 1353 aa7.07□□□□□ -1.28
SFXN1-202ENST00000421887 USP19O94966 1318 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 RGPD5Q99666 1765 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 PF4P02776 101 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 GJA9P57773 515 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 ARSHQ5FYA8 562 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 SAPCD2Q86UD0 394 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 LOXL4Q96JB6 756 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.06□□□□□ -1.28
SFXN1-202ENST00000421887 CHST7Q9NS84 486 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 RNF19AQ9NV58 838 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms