RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CPT1AP50416 773 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 ACLYP53396 1101 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 ATN1P54259 1190 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-202ENST00000421712 CDHR1Q96JP9 859 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 INPP4AQ96PE3 977 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-202ENST00000421712 MLXIPQ9HAP2 919 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 SPATA31C2B4DYI2 1134 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 GGPS1O95749 300 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 MYL3P08590 195 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 ITGB5P18084 799 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 CST5P28325 142 aaPredicted RBP17.96■□□□□ 0.47
BRAT1-202ENST00000421712 ICAM3P32942 547 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 MTMR1Q13613 665 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 LAMC2Q13753 1193 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 DAGLBQ8NCG7 672 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 AFG1LQ8WV93 481 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 MXRA8Q9BRK3 442 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
BRAT1-202ENST00000421712 CCDC194A0A1B0GVG4 234 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 A0A1W2PQ45 241 aaPredicted RBP17.95■□□□□ 0.46
BRAT1-202ENST00000421712 A0A1W2PQY0 241 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 CTAGE5O15320 804 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 COL6A1P12109 1028 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 UBA1P22314 1058 aaKnown RBP17.95■□□□□ 0.46
BRAT1-202ENST00000421712 KRT2P35908 639 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 SP2Q02086 613 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 GUCY1B3Q02153 619 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 NEDD9Q14511 834 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 CEP55Q53EZ4 464 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 CELF3Q5SZQ8 465 aaKnown RBP17.95■□□□□ 0.46
BRAT1-202ENST00000421712 CCSAPQ6IQ19 270 aaPredicted RBP17.95■□□□□ 0.46
BRAT1-202ENST00000421712 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 SPATA33Q96N06 139 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 PCDH10Q9P2E7 1040 aa17.95■□□□□ 0.46
BRAT1-202ENST00000421712 MKI67P46013 3256 aaKnown RBP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 MYH7BA7E2Y1 1941 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 NOP56O00567 594 aaKnown RBP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 EVI5O60447 810 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 NKX3-2P78367 333 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 ARHGAP1Q07960 439 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 SEMA3FQ13275 785 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 NONOQ15233 471 aaKnown RBP eCLIP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 SAFBQ15424 915 aaKnown RBP eCLIP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 KRT40Q6A162 431 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 SLC39A5Q6ZMH5 540 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 CYFIP1Q7L576 1253 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 KRT25Q7Z3Z0 450 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 CYP2W1Q8TAV3 490 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 TBCKQ8TEA7 893 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 POLR3EQ9NVU0 708 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 KIF3AQ9Y496 699 aa17.94■□□□□ 0.46
BRAT1-202ENST00000421712 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
BRAT1-202ENST00000421712 MAFGO15525 162 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 KPNA6O60684 536 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 CYP3A4P08684 503 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 SP4Q02446 784 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 NPY5RQ15761 445 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 MYSM1Q5VVJ2 828 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 OXER1Q8TDS5 423 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 SMC3Q9UQE7 1217 aa17.93■□□□□ 0.46
BRAT1-202ENST00000421712 A6NJR5 290 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 M0R2N6 131 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 CABYRO75952 493 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 MMP1P03956 469 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 ARP10275 920 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 USP11P51784 963 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 GNL2Q13823 731 aaKnown RBP17.92■□□□□ 0.46
BRAT1-202ENST00000421712 DGKDQ16760 1214 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 INF2Q27J81 1249 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 LRRC26Q2I0M4 334 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 PRR16Q569H4 304 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 PPTC7Q8NI37 304 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 EMID1Q96A84 441 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-202ENST00000421712 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 SENP7Q9BQF6 1050 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 KCNH7Q9NS40 1196 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 ATP11BQ9Y2G3 1177 aa17.92■□□□□ 0.46
BRAT1-202ENST00000421712 FAM86B1E9PN63 330 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 MEIS1O00470 390 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 ATP9AO75110 1047 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 MMP3P08254 477 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 FAM86B2P0C5J1 330 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 NR5A1Q13285 461 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 METTL7BQ6UX53 244 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 NIPA1Q7RTP0 329 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
BRAT1-202ENST00000421712 C7orf61Q8IZ16 206 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms