RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 PTK7Q13308 1070 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 IKBKEQ14164 716 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 HIC1Q14526 733 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 HSDL1Q3SXM5 330 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.91□□□□□ -0.663e-7■■□□□ 13.3
SCRN1-204ENST00000421434 SMC5Q8IY18 1101 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
SCRN1-204ENST00000421434 SPATA33Q96N06 139 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 PDCD2LQ9BRP1 358 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 KATNAL1Q9BW62 490 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 C1QTNF1Q9BXJ1 281 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 KRT23Q9C075 422 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 CTNNA3Q9UI47 895 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 PCDHA1Q9Y5I3 950 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 BRWD1Q9NSI6 2320 aa10.91□□□□□ -0.66
SCRN1-204ENST00000421434 HAS3O00219 553 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 GJB5O95377 273 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 GGPS1O95749 300 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 F2P00734 622 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 THPOP40225 353 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 HSD17B4P51659 736 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 NUCB1Q02818 461 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 RBL2Q08999 1139 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 MBTPS1Q14703 1052 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 TRIM71Q2Q1W2 868 aaKnown RBP10.9□□□□□ -0.66
SCRN1-204ENST00000421434 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
SCRN1-204ENST00000421434 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 STOX1Q6ZVD7 989 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 CYB5R4Q7L1T6 521 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 HOMER1Q86YM7 354 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 GPKOWQ92917 476 aaPredicted RBP eCLIP10.9□□□□□ -0.66
SCRN1-204ENST00000421434 TGS1Q96RS0 853 aaKnown RBP10.9□□□□□ -0.66
SCRN1-204ENST00000421434 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 BCAS3Q9H6U6 928 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 MLXIPQ9HAP2 919 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 MAD2L2Q9UI95 211 aa10.9□□□□□ -0.66
SCRN1-204ENST00000421434 LINC01553A4QN01 128 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 HIP1O00291 1037 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 ZBTB5O15062 677 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 LGR5O75473 907 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 NT5C2P49902 561 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 ERVK-21P61565 698 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 PGM5Q15124 567 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 DBF4BQ8NFT6 615 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCRN1-204ENST00000421434 FAM122AQ96E09 287 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 IL25Q9H293 177 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
SCRN1-204ENST00000421434 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
SCRN1-204ENST00000421434 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
SCRN1-204ENST00000421434 EFCAB14O75071 495 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
SCRN1-204ENST00000421434 CCND2P30279 289 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 SEC23AQ15436 765 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 SLC35G1Q2M3R5 365 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 KCNV1Q6PIU1 500 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 ATP6V0A1Q93050 837 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 PIGSQ96S52 555 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 C17orf80Q9BSJ5 609 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 C16orf70Q9BSU1 422 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 LRFN3Q9BTN0 628 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 OSBPL7Q9BZF2 842 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 MAP3K20Q9NYL2 800 aaKnown RBP10.88□□□□□ -0.67
SCRN1-204ENST00000421434 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 INSL6Q9Y581 213 aa10.88□□□□□ -0.67
SCRN1-204ENST00000421434 C17orf102A2RUQ5 167 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 H3BRB1 525 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 TREHO43280 583 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 UPP2O95045 317 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 AMHP03971 560 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 TGFB3P10600 412 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 HOXD8P13378 290 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-204ENST00000421434 KCNA5P22460 613 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 PLA2G5P39877 138 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 TRDNQ13061 729 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 SERINC5Q86VE9 423 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 RNPEPQ9H4A4 650 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
SCRN1-204ENST00000421434 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 CD320Q9NPF0 282 aa10.87□□□□□ -0.67
SCRN1-204ENST00000421434 EMSYQ7Z589 1322 aa10.86□□□□□ -0.67
SCRN1-204ENST00000421434 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
SCRN1-204ENST00000421434 MYH7BA7E2Y1 1941 aa10.86□□□□□ -0.67
SCRN1-204ENST00000421434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.86□□□□□ -0.67
SCRN1-204ENST00000421434 FAM86C2PA6NEL3 165 aa10.86□□□□□ -0.67
SCRN1-204ENST00000421434 NOP56O00567 594 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms