RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 MRPL12P52815 198 aaKnown RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 TTBK2Q6IQ55 1244 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 CDC42EP5Q6NZY7 148 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 DYMQ7RTS9 669 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 MYOCDQ8IZQ8 938 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 TXLNBQ8N3L3 684 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 GLIS3Q8NEA6 775 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 SECISBP2LQ93073 1101 aaKnown RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 MKL1Q969V6 931 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 CEP63Q96MT8 703 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 TSG101Q99816 390 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 DNAJC18Q9H819 358 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 ZCCHC17Q9NP64 241 aaKnown RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 KCNMB3Q9NPA1 279 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 LRRC53A6NM62 1247 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 USP17L10C9JJH3 530 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 EIF6P56537 245 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CYP27A1Q02318 531 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 KCNMA1Q12791 1236 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 KIF5AQ12840 1032 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 GPS2Q13227 327 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 FAM26FQ5R3K3 315 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 HGSNATQ68CP4 663 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 APOBEC3HQ6NTF7 200 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 MMGT1Q8N4V1 131 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 TRIM58Q8NG06 486 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SYN2Q92777 582 aaPredicted RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC42Q96M95 316 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 USP40Q9NVE5 1235 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SNX12Q9UMY4 172 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 JRKLQ9Y4A0 524 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CAPN6Q9Y6Q1 641 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 AFF2P51816 1311 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 LRRIQ3A6PVS8 624 aaPredicted RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 USO1O60763 962 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SRGAP2O75044 1071 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 NPM3O75607 178 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 NOL4O94818 638 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 HLA-DOAP06340 250 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 IDEP14735 1019 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 EIF4A3P38919 411 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 USP11P51784 963 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SPA17Q15506 151 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 KRT26Q7Z3Y9 468 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 C2CD5Q86YS7 1000 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CREG2Q8IUH2 290 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 IFIH1Q9BYX4 1025 aaKnown RBP9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 KCTD10Q9H3F6 313 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CALCOCO1Q9P1Z2 691 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 CEP72Q9P209 647 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 NYAP2Q9P242 653 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 DUSP10Q9Y6W6 482 aa9.67□□□□□ -0.86
TRIM49D1-201ENST00000420869 TACC1O75410 805 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 NPR1P16066 1061 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 MMP14P50281 582 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 FKBP3Q00688 224 aaKnown RBP9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 AP3B2Q13367 1082 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC96Q2M329 555 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 QRICH1Q2TAL8 776 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 IQCEQ6IPM2 695 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 TEKT1Q969V4 418 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 MRIQ9BWK5 157 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 FGFBP2Q9BYJ0 223 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 ANO3Q9BYT9 981 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 ACBD3Q9H3P7 528 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 PSTPIP2Q9H939 334 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 PANK4Q9NVE7 773 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 PCDHA12Q9UN75 941 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 DOCK1Q14185 1865 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
TRIM49D1-201ENST00000420869 LCTP09848 1927 aa9.65□□□□□ -0.86
TRIM49D1-201ENST00000420869 RLFQ13129 1914 aa9.65□□□□□ -0.86
TRIM49D1-201ENST00000420869 ATP8B3O60423 1300 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms