RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 C8orf76Q96K31 380 aa23.54■■□□□ 1.36
HMGXB4-203ENST00000420166 TSEN34Q9BSV6 310 aaKnown RBP23.54■■□□□ 1.36
HMGXB4-203ENST00000420166 C11orf49Q9H6J7 331 aa23.54■■□□□ 1.36
HMGXB4-203ENST00000420166 MMP1P03956 469 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 COL6A1P12109 1028 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 UBA1P22314 1058 aaKnown RBP23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 BEX3Q00994 111 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 ARHGAP1Q07960 439 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 FSCN1Q16658 493 aaKnown RBP23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 GNASQ5JWF2 1037 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 SNX21Q969T3 373 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 MXRA8Q9BRK3 442 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 BRMS1Q9HCU9 246 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 JADE2Q9NQC1 790 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 PHF24Q9UPV7 400 aa23.53■■□□□ 1.36
HMGXB4-203ENST00000420166 K7ELQ4 463 aaPredicted RBP23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 KRT2P35908 639 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 SP2Q02086 613 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 MTMR1Q13613 665 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 NONOQ15233 471 aaKnown RBP eCLIP23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 KCNA10Q16322 511 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 CEP55Q53EZ4 464 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 PCSK9Q8NBP7 692 aaKnown RBP23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 CDHR1Q96JP9 859 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 KIF3AQ9Y496 699 aa23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.52■■□□□ 1.36
HMGXB4-203ENST00000420166 GGPS1O95749 300 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 ZNF76P36508 570 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 ACLYP53396 1101 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 CELF3Q5SZQ8 465 aaKnown RBP23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 NIPA1Q7RTP0 329 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 DHX37Q8IY37 1157 aaKnown RBP23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 CYP2W1Q8TAV3 490 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 TBCKQ8TEA7 893 aa23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 EMID1Q96A84 441 aaPredicted RBP23.51■■□□□ 1.35
HMGXB4-203ENST00000420166 CCDC194A0A1B0GVG4 234 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 MOXD2PA6NHM9 499 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 MEIS1O00470 390 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 GJB2P29033 226 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 CIITAP33076 1130 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 CPT1AP50416 773 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 GUCY1B3Q02153 619 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 NR5A1Q13285 461 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 DIS3L2Q8IYB7 885 aaKnown RBP23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 FBXO18Q8NFZ0 1043 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 TNFRSF25Q93038 417 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 SENP7Q9BQF6 1050 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 SMC3Q9UQE7 1217 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 ALPK3Q96L96 1907 aa23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 MKI67P46013 3256 aaKnown RBP23.5■■□□□ 1.35
HMGXB4-203ENST00000420166 A6NJR5 290 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 FAM86B1E9PN63 330 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 MAFGO15525 162 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 EDIL3O43854 480 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 ZEB2O60315 1214 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 ASGR1P07306 291 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 FAM86B2P0C5J1 330 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 USP11P51784 963 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 LAMC2Q13753 1193 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 NEDD9Q14511 834 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 BRDTQ58F21 947 aaPredicted RBP23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 MYSM1Q5VVJ2 828 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 AFG1LQ8WV93 481 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 FERMT2Q96AC1 680 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 KCNH7Q9NS40 1196 aa23.49■■□□□ 1.35
HMGXB4-203ENST00000420166 IGLV3-22A0A075B6J6 115 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 A0A1W2PQ45 241 aaPredicted RBP23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 A0A1W2PQY0 241 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 BTBD18B2RXH4 712 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 SORBS3O60504 671 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 KCNA2P16389 499 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 SAFBQ15424 915 aaKnown RBP eCLIP23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 INF2Q27J81 1249 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 PLA2G4DQ86XP0 818 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 HSCBQ8IWL3 235 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 PDE4DIPQ5VU43 2346 aa23.48■■□□□ 1.35
HMGXB4-203ENST00000420166 ATP9AO75110 1047 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 MMP3P08254 477 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 ARP10275 920 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 METTL7BQ6UX53 244 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 GIMAP8Q8ND71 665 aaPredicted RBP23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 PPTC7Q8NI37 304 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 SPATA33Q96N06 139 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 BCAS3Q9H6U6 928 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 MLXIPQ9HAP2 919 aa23.47■■□□□ 1.35
HMGXB4-203ENST00000420166 FAM205CA6NFA0 338 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 SETQ01105 290 aaPredicted RBP23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 MLLT1Q03111 559 aaPredicted RBP23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 EARS2Q5JPH6 523 aaKnown RBP23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 CXCL17Q6UXB2 119 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 CYFIP1Q7L576 1253 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 HTATIP2Q9BUP3 242 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 AGO4Q9HCK5 861 aaKnown RBP23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 POLR3EQ9NVU0 708 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 PKD2L1Q9P0L9 805 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 SCN10AQ9Y5Y9 1956 aa23.46■■□□□ 1.35
HMGXB4-203ENST00000420166 KPNA6O60684 536 aa23.45■■□□□ 1.34
HMGXB4-203ENST00000420166 CABYRO75952 493 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms