RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 HERVK_113P62684 666 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 GRIN1Q05586 938 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 TYRO3Q06418 890 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 SNW1Q13573 536 aaKnown RBP6.72□□□□□ -1.33
HMGB3-202ENST00000419110 POSTNQ15063 836 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 CAMK4Q16566 473 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 DLK2Q6UY11 383 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 LBX2Q6XYB7 198 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 KRBA2Q6ZNG9 492 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 RNF207Q6ZRF8 634 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 MOB2Q70IA6 237 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 CABP7Q86V35 215 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 PDILTQ8N807 584 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 IQUBQ8NA54 791 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 CHST13Q8NET6 341 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 REPS2Q8NFH8 660 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 SNX29Q8TEQ0 813 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 SMCR8Q8TEV9 937 aaPredicted RBP6.72□□□□□ -1.33
HMGB3-202ENST00000419110 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 DHX58Q96C10 678 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 SLC10A4Q96EP9 437 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 PARK7Q99497 189 aaKnown RBP6.72□□□□□ -1.33
HMGB3-202ENST00000419110 MPHOSPH6Q99547 160 aaKnown RBP6.72□□□□□ -1.33
HMGB3-202ENST00000419110 PAGR1Q9BTK6 254 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 TMEM60Q9H2L4 133 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 GRPEL1Q9HAV7 217 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 DISC1Q9NRI5 854 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 ANO10Q9NW15 660 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 HOXC10Q9NYD6 342 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 STK17AQ9UEE5 414 aa6.72□□□□□ -1.33
HMGB3-202ENST00000419110 ZNF214Q9UL59 606 aaPredicted RBP6.72□□□□□ -1.33
HMGB3-202ENST00000419110 SIP14410 1827 aa6.71□□□□□ -1.33
HMGB3-202ENST00000419110 CYP3A7-CYP3A51PA0A087WV96 503 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCL15-CCL14A0A0B4J2E2 113 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 ACTN4O43707 911 aaKnown RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CYP3A4P08684 503 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CYP3A7P24462 503 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCND2P30279 289 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CIITAP33076 1130 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 STAT3P40763 770 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 TXKP42681 527 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 HUNKP57058 714 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 RPS6P62753 249 aaKnown RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCNA1P78396 465 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 TMEM132BQ14DG7 1078 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCL15Q16663 113 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 Q4G0T1 1027 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 PRR16Q569H4 304 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 MUM1L1Q5H9M0 696 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 SPECC1Q5M775 1068 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 KRT79Q5XKE5 535 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 NIPA1Q7RTP0 329 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 RIOX2Q8IUF8 465 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 IGSF22Q8N9C0 903 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 FAM200AQ8TCP9 573 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CRYGNQ8WXF5 182 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CLEC4DQ8WXI8 215 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 SMARCE1Q969G3 411 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 FAM20AQ96MK3 541 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 CCSER1Q9C0I3 900 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 NAT10Q9H0A0 1025 aaKnown RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 SPATC1LQ9H0A9 340 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 ASCC2Q9H1I8 757 aaPredicted RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 GPBP1L1Q9HC44 474 aaPredicted RBP6.71□□□□□ -1.34
HMGB3-202ENST00000419110 KCNMB3Q9NPA1 279 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 LRWD1Q9UFC0 647 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 DACH1Q9UI36 760 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 ADAMTS5Q9UNA0 930 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 SLC45A1Q9Y2W3 748 aa6.71□□□□□ -1.34
HMGB3-202ENST00000419110 SRCAPQ6ZRS2 3230 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 B4DLN1 442 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 BHMG1C9JSJ3 638 aaPredicted RBP6.7□□□□□ -1.34
HMGB3-202ENST00000419110 GAS7O60861 476 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 SLC25A27O95847 323 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 MYL1P05976 194 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 SLFN14P0C7P3 912 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 PLCG1P19174 1290 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 EIF2AK2P19525 551 aaKnown RBP6.7□□□□□ -1.34
HMGB3-202ENST00000419110 GJA5P36382 358 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 TPM4P67936 248 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 UBXN2AP68543 259 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 KARSQ15046 597 aaKnown RBP6.7□□□□□ -1.34
HMGB3-202ENST00000419110 GNPTABQ3T906 1256 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 ANO6Q4KMQ2 910 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 CEP55Q53EZ4 464 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 LRCH2Q5VUJ6 765 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 ARHGEF16Q5VV41 709 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 RRAGBQ5VZM2 374 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 PCNX4Q63HM2 1172 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 NCAPH2Q6IBW4 605 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 ANKRD23Q86SG2 305 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
HMGB3-202ENST00000419110 RASAL3Q86YV0 1011 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms