RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
SNAP47-204ENST00000418653 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
SNAP47-204ENST00000418653 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
SNAP47-204ENST00000418653 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
SNAP47-204ENST00000418653 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
SNAP47-204ENST00000418653 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 F13A1P00488 732 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 SYT1P21579 422 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 CDK8P49336 464 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 UVSSAQ2YD98 709 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 CREB3L3Q68CJ9 461 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 LRRC8DQ7L1W4 858 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 AMOTL1Q8IY63 956 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 EAF2Q96CJ1 260 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 A1CFQ9NQ94 594 aaKnown RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 FEM1BQ9UK73 627 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 RBM47A0AV96 593 aaKnown RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 GJB2P29033 226 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 EVX2Q03828 476 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 GPM6BQ13491 265 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 IKBKEQ14164 716 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 KRT32Q14532 448 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 GPNMBQ14956 572 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 DYNLL2Q96FJ2 89 aa13.5□□□□□ -0.25
SNAP47-204ENST00000418653 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
SNAP47-204ENST00000418653 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 MYL3P08590 195 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 CYP2D6P10635 497 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 KCNA4P22459 653 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 VCPP55072 806 aaKnown RBP13.49□□□□□ -0.25
SNAP47-204ENST00000418653 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
SNAP47-204ENST00000418653 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
SNAP47-204ENST00000418653 NDUFB10O96000 172 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 PTMAP06454 111 aaKnown RBP13.48□□□□□ -0.25
SNAP47-204ENST00000418653 TPM2P07951 284 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
SNAP47-204ENST00000418653 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
SNAP47-204ENST00000418653 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 CD207Q9UJ71 328 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
SNAP47-204ENST00000418653 DCHS1Q96JQ0 3298 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 F5H6K3 240 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 SLC27A2O14975 620 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 EYA4O95677 639 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 AMHP03971 560 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 KLRC3Q07444 240 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 RNF146Q9NTX7 359 aa13.48□□□□□ -0.25
SNAP47-204ENST00000418653 A6NJR5 290 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 RAD21O60216 631 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
SNAP47-204ENST00000418653 ATP5JP18859 108 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 PTGISQ16647 500 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 SDR42E1Q8WUS8 393 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
SNAP47-204ENST00000418653 GDPD2Q9HCC8 539 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 EMSYQ7Z589 1322 aa13.47□□□□□ -0.25
SNAP47-204ENST00000418653 ZNF292O60281 2723 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 VPS37CA5D8V6 355 aaPredicted RBP13.46□□□□□ -0.25
SNAP47-204ENST00000418653 NBNO60934 754 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 RB1P06400 928 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 CPA1P15085 419 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 PDE6AP16499 860 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 RNF214Q8ND24 703 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 OR6J1Q8NGC5 347 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 NKD2Q969F2 451 aaPredicted RBP13.46□□□□□ -0.25
SNAP47-204ENST00000418653 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
SNAP47-204ENST00000418653 WDR11Q9BZH6 1224 aa13.46□□□□□ -0.25
SNAP47-204ENST00000418653 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.26
SNAP47-204ENST00000418653 PTGS1P23219 599 aa13.46□□□□□ -0.26
SNAP47-204ENST00000418653 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.26
SNAP47-204ENST00000418653 TMEM192Q8IY95 271 aa13.46□□□□□ -0.26
SNAP47-204ENST00000418653 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.26
SNAP47-204ENST00000418653 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.26
SNAP47-204ENST00000418653 RWDD3Q9Y3V2 267 aa13.46□□□□□ -0.26
SNAP47-204ENST00000418653 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.26
SNAP47-204ENST00000418653 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms