RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PIGWQ7Z7B1 504 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 USP38Q8NB14 1042 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 PSMD1Q99460 953 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 ZKSCAN3Q9BRR0 538 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 MTA3Q9BTC8 594 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 YIPF3Q9GZM5 350 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
HMGXB4-202ENST00000418170 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 LUC7L3O95232 432 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 SLC5A9Q2M3M2 681 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 MFSD6Q6ZSS7 791 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 SIK3Q9Y2K2 1263 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 AFF2P51816 1311 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 KCPQ6ZWJ8 1503 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 EPHB6O15197 1021 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 MYL1P05976 194 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 SLC1A4P43007 532 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 NPY5RQ15761 445 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 PDCD2Q16342 344 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 TMED8Q6PL24 325 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 EEF2KMTQ96G04 330 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 NAPBQ9H115 298 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 FBXL5Q9UKA1 691 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 SPATA31A3Q5VYP0 1347 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 ZNF335Q9H4Z2 1342 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 RREB1Q92766 1687 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 A0A0G2JS52 829 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 BICDL2A1A5D9 508 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 CTNND1O60716 968 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 ZPR1O75312 459 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 PALMO75781 387 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 GFPT1Q06210 699 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 PPP2R5BQ15173 497 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 SLC30A9Q6PML9 568 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 TRPM8Q7Z2W7 1104 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 KLHL7Q8IXQ5 586 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 IFNL3Q8IZI9 196 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 UBLCP1Q8WVY7 318 aaPredicted RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 P2RX5Q93086 422 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 TLCD1Q96CP7 247 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 FAM210AQ96ND0 272 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 MOV10L1Q9BXT6 1211 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 DISC1Q9NRI5 854 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 SH3BP1Q9Y3L3 701 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 TCRBV5S4A2TA0A5A2 114 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 RBAK-RBAKDNI3L0D1 243 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 MPHOSPH10O00566 681 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 GCP02774 474 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 NQO1P15559 274 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 PDE6AP16499 860 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 CCNE1P24864 410 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 LONP1P36776 959 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 CCNG1P51959 295 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 NAALADL2Q58DX5 795 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 PIH1D3Q9NQM4 214 aaKnown RBP8.81□□□□□ -1
HMGXB4-202ENST00000418170 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
HMGXB4-202ENST00000418170 SSU72P8A0A1W2PR75 194 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 LRRC53A6NM62 1247 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 PRDM1O75626 825 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 IDH1O75874 414 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 NEFHP12036 1026 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ABL2P42684 1182 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 TRAPPC10P48553 1259 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 SNX1Q13596 522 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 CCDC57Q2TAC2 916 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 KRT71Q3SY84 523 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ARL6IP4Q66PJ3 421 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 CACNA2D4Q7Z3S7 1137 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 NEUROG2Q9H2A3 272 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 FAM207AQ9NSI2 230 aaPredicted RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 AGAP1Q9UPQ3 857 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 COL5A2P05997 1499 aaPredicted RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 CES2O00748 559 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 PRPF3O43395 683 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 FTCDO95954 541 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 DNA2P51530 1060 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ALDH5A1P51649 535 aaPredicted RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 FUT2Q10981 343 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 RRP12Q5JTH9 1297 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 MFN1Q8IWA4 741 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 MDM1Q8TC05 714 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ZNF512BQ96KM6 892 aaPredicted RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 ZFATQ9P243 1243 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 NKRFO15226 690 aaKnown RBP eCLIP8.8□□□□□ -18e-7■□□□□ 8.8
HMGXB4-202ENST00000418170 SART1O43290 800 aaKnown RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 RTN3O95197 1032 aaPredicted RBP8.8□□□□□ -1
HMGXB4-202ENST00000418170 FERP16591 822 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 KCNJ2P63252 427 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 NAB2Q15742 525 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD20A2Q5SQ80 823 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD20A1Q5TYW2 823 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD20A3Q5VUR7 823 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 BRINP3Q76B58 766 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms