RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MAPK4P31152 587 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 SOX18P35713 384 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 ST13P50502 369 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 SLC20A2Q08357 652 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 DMWDQ09019 674 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 GRB10Q13322 594 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 AXDND1Q5T1B0 1012 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 TREML2Q5T2D2 321 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 MTERF4Q7Z6M4 381 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 TDRD7Q8NHU6 1098 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 ARNTL2Q8WYA1 636 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 KIFC2Q96AC6 838 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 GMCL1Q96IK5 515 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 PNMA5Q96PV4 448 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 TCF12Q99081 682 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 ISCA1Q9BUE6 129 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 EHD4Q9H223 541 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 CHMP4BQ9H444 224 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 PICK1Q9NRD5 415 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 DLL3Q9NYJ7 618 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 MIS18AQ9NYP9 233 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 GMPR2Q9P2T1 348 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 MORF4L1Q9UBU8 362 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 ATXN7L1Q9ULK2 861 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 TTF2Q9UNY4 1162 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 AFG3L2Q9Y4W6 797 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 COL4A4P53420 1690 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 PTPRZ1P23471 2315 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 PRRC2BQ5JSZ5 2229 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 GPR179Q6PRD1 2367 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 CLGNO14967 610 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 ANXA1P04083 346 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 PTPRAP18433 802 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 MCCP23508 829 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 AVPR2P30518 371 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 CRKP46108 304 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 KCNJ4P48050 445 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 HYAL2Q12891 473 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 LRRC41Q15345 812 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 ANKRD33Q7Z3H0 272 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 KIAA2013Q8IYS2 634 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 SCYL3Q8IZE3 742 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 CEP120Q8N960 986 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 BHMTQ93088 406 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 TOX2Q96NM4 488 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 IL23AQ9NPF7 189 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 TBX21Q9UL17 535 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 PHF24Q9UPV7 400 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 ACACBO00763 2458 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 DNAH12Q6ZR08 3092 aa6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 SETXQ7Z333 2677 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-206ENST00000417628 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 TRIM75PA6NK02 468 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 U2SURPO15042 1029 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 PDE8AO60658 829 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 FGBP02675 491 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 PSAPP07602 524 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 CYBAP13498 195 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 IL1R1P14778 569 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 ATP2A2P16615 1042 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 FGFR3P22607 806 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 GSTT1P30711 240 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 TERF1P54274 439 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 CTBSQ01459 385 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 TMEM67Q5HYA8 995 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 FKBP1CQ5VVH2 108 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 GPR142Q7Z601 462 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 LURAP1LQ8IV03 231 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 TRPV1Q8NER1 839 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 PHACTR3Q96KR7 559 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 OSMRQ99650 979 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 CAPN10Q9HC96 672 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 COPRSQ9NQ92 184 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 FLRT1Q9NZU1 646 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 LMCD1Q9NZU5 365 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 CHD7Q9P2D1 2997 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 SLC4A7Q9Y6M7 1214 aa6.72□□□□□ -1.33
ECHDC1-206ENST00000417628 TPRP12270 2363 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 A0A1W2PQ45 241 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 A0A1W2PQY0 241 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms