RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-203ENST00000416188 COPB2P35606 906 aa17.08■□□□□ 0.33
PHRF1-203ENST00000416188 RASSF7Q02833 373 aa17.08■□□□□ 0.33
PHRF1-203ENST00000416188 KLRC3Q07444 240 aa17.08■□□□□ 0.33
PHRF1-203ENST00000416188 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.33
PHRF1-203ENST00000416188 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.33
PHRF1-203ENST00000416188 SLC39A2Q9NP94 309 aa17.08■□□□□ 0.33
PHRF1-203ENST00000416188 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
PHRF1-203ENST00000416188 CCL15Q16663 113 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 GNAT1P11488 350 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
PHRF1-203ENST00000416188 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■■■ 28.7
PHRF1-203ENST00000416188 PTPROQ16827 1216 aa17.08■□□□□ 0.32
PHRF1-203ENST00000416188 PLSCR1O15162 318 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 ARMCX5Q6P1M9 558 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 IFRD2Q12894 506 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 B4GALNT4Q76KP1 1039 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 ST7Q9NRC1 585 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 UBN2Q6ZU65 1347 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 KMT5BQ4FZB7 885 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 PPANQ9NQ55 473 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-203ENST00000416188 GOLGA5Q8TBA6 731 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
PHRF1-203ENST00000416188 ENTPD3O75355 529 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 AMFRQ9UKV5 643 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 TRIML1Q8N9V2 468 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 OSBPL5Q9H0X9 879 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 ITIH3Q06033 890 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 LONRF2Q1L5Z9 754 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 KRT71Q3SY84 523 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 SIRT2Q8IXJ6 389 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 IQCDQ96DY2 449 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 TLR3O15455 904 aaKnown RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
PHRF1-203ENST00000416188 CETPP11597 493 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 FYB2Q5VWT5 728 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
PHRF1-203ENST00000416188 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
PHRF1-203ENST00000416188 KRT15P19012 456 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
PHRF1-203ENST00000416188 ZBTB5O15062 677 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 FDX1P10109 184 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 CASC4Q6P4E1 433 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 ZNF280CQ8ND82 737 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 TRIM58Q8NG06 486 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
PHRF1-203ENST00000416188 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 PI4K2BQ8TCG2 481 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 STMN2Q93045 179 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 PPP2R2CQ9Y2T4 447 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 TTLL3Q9Y4R7 772 aa17.05■□□□□ 0.32
PHRF1-203ENST00000416188 ZNF500O60304 480 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-203ENST00000416188 IFNB1P01574 187 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 LIFRP42702 1097 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 PPFIBP2Q8ND30 876 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 KCNK3O14649 394 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 BUB1O43683 1085 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
PHRF1-203ENST00000416188 AKR1B1P15121 316 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 OAS2P29728 719 aaKnown RBP17.04■□□□□ 0.32
PHRF1-203ENST00000416188 COG2Q14746 738 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-203ENST00000416188 HHATQ5VTY9 493 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 CCDC110Q8TBZ0 833 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
PHRF1-203ENST00000416188 CSF1RP07333 972 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms