RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MCMBPQ9BTE3 642 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 A0A087X1B8 175 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 MAFKO60675 156 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 PLS3P13797 630 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 PTH1RQ03431 593 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 COL9A2Q14055 689 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZYXQ15942 572 aaKnown RBP5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 RIOX2Q8IUF8 465 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 AMER2Q8N7J2 671 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZG16BQ96DA0 208 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 MBD6Q96DN6 1003 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 KLHL25Q9H0H3 589 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 AKT3Q9Y243 479 aa5.26□□□□□ -1.57
TRAPPC13-203ENST00000415825 HGSO14964 777 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 FBXO21O94952 628 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 EPHX1P07099 455 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 MLLT6P55198 1093 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 NANOS3P60323 173 aaKnown RBP5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 CCDC27Q2M243 656 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 CR1LQ2VPA4 569 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 CEP68Q76N32 757 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 ARHGEF39Q8N4T4 335 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 TMEM169Q96HH4 297 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 LRRC37BQ96QE4 947 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 BCL2L13Q9BXK5 485 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 DTLQ9NZJ0 730 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZFR2Q9UPR6 939 aaKnown RBP5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZNF652Q9Y2D9 606 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 PCDHB4Q9Y5E5 795 aa5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 TIMM13Q9Y5L4 95 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC13-203ENST00000415825 KCNH1O95259 989 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 ADH4P08319 380 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 COMTP21964 271 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 SCRN1Q12765 414 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 SPATA32Q96LK8 384 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 PTPN18Q99952 460 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 TIMELESSQ9UNS1 1208 aa5.24□□□□□ -1.57
TRAPPC13-203ENST00000415825 PDIA4P13667 645 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZNF76P36508 570 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 MRPL58Q14197 206 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 RUFY4Q6ZNE9 571 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 TMEM87AQ8NBN3 555 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 PPP1R14AQ96A00 147 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZNF503Q96F45 646 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 FAM89AQ96GI7 184 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 CHAMP1Q96JM3 812 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 IKZF4Q9H2S9 585 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 ADAM29Q9UKF5 820 aa5.23□□□□□ -1.57
TRAPPC13-203ENST00000415825 FPR2P25090 351 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 TEPPQ6URK8 271 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 OR6P1Q8NGX9 317 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 ZCCHC14Q8WYQ9 949 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 GNRHR2Q96P88 292 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 MEGF9Q9H1U4 602 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 GPRC5CQ9NQ84 441 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 PPT2Q9UMR5 302 aa5.22□□□□□ -1.57
TRAPPC13-203ENST00000415825 ANKRD34BA5PLL1 514 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 DGKIO75912 1065 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 LMO1P25800 156 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 VASNQ6EMK4 673 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 TMC5Q6UXY8 1006 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 GIPC2Q8TF65 315 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 DPF3Q92784 378 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 DIO2Q92813 273 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 EDAQ92838 391 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 APBA2Q99767 749 aa5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 TMEFF2Q9UIK5 374 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC13-203ENST00000415825 CHGBP05060 677 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 EIF6P56537 245 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 RAC3P60763 192 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 KCNAB2Q13303 367 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 PPP2R5EQ16537 467 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 E4F1Q66K89 784 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 DPY19L2P1Q6NXN4 242 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 Q6ZUG5 572 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 TAX1BP1Q86VP1 789 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 C1orf210Q8IVY1 113 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 TRIM48Q8IWZ4 208 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 PHOSPHO1Q8TCT1 267 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 COPS5Q92905 334 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 PLEKHG4BQ96PX9 1271 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 SLC4A7Q9Y6M7 1214 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 X6R8D5 127 aa5.2□□□□□ -1.58
TRAPPC13-203ENST00000415825 KRIT1O00522 736 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 FOXS1O43638 330 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 NARSO43776 548 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 MAKP20794 623 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 SMAD2Q15796 467 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 MBLAC2Q68D91 279 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 BVESQ8NE79 360 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 CYP26B1Q9NR63 512 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 METTL5Q9NRN9 209 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 PCDHB10Q9UN67 800 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms