RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 PNMA6FA0A0J9YX94 578 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 RBM47A0AV96 593 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 ARIH2O95376 493 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 KIF5BP33176 963 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 HSD17B4P51659 736 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 FSCN1Q16658 493 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 DUSP28Q4G0W2 176 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 ARHGEF16Q5VV41 709 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 CXCL17Q6UXB2 119 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 CCDC82Q8N4S0 544 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 SPZ1Q9BXG8 430 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
LINC01090-201ENST00000415357 SNX14Q9Y5W7 946 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
LINC01090-201ENST00000415357 SZT2Q5T011 3432 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 TRIM43BA6NCK2 446 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 HSPA4P34932 840 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 NKX3-2P78367 333 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 GHRHRQ02643 423 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 KRT32Q14532 448 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 PPP2R5BQ15173 497 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 APOA5Q6Q788 366 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 SEPT14Q6ZU15 432 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
LINC01090-201ENST00000415357 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 OR6J1Q8NGC5 347 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
LINC01090-201ENST00000415357 SCFD2Q8WU76 684 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 KCNB2Q92953 911 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
LINC01090-201ENST00000415357 RRP36Q96EU6 259 aaKnown RBP11.1□□□□□ -0.63
LINC01090-201ENST00000415357 GLT1D1Q96MS3 346 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 MPHOSPH6Q99547 160 aaKnown RBP11.1□□□□□ -0.63
LINC01090-201ENST00000415357 PXMP2Q9NR77 195 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 BRPF3Q9ULD4 1205 aa11.1□□□□□ -0.63
LINC01090-201ENST00000415357 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 CLTBP09497 229 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 CALM1P0DP23 149 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 CALM2P0DP24 149 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 CALM3P0DP25 149 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 ITGB8P26012 769 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 BMP8BP34820 402 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 GNAQP50148 359 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 PSMC6P62333 389 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 FANCBQ8NB91 859 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 PPP1R13LQ8WUF5 828 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 PDCD2LQ9BRP1 358 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 NAP1L2Q9ULW6 460 aaPredicted RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 LAMA2P24043 3122 aaKnown RBP11.09□□□□□ -0.63
LINC01090-201ENST00000415357 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 ELP1O95163 1332 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
LINC01090-201ENST00000415357 A0A0U1RQG5 324 aaPredicted RBP11.08□□□□□ -0.64
LINC01090-201ENST00000415357 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 GOLGA8BA8MQT2 603 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 B4DLN1 442 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 ARVCFO00192 962 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 SOX1O00570 391 aaPredicted RBP11.08□□□□□ -0.64
LINC01090-201ENST00000415357 ZBTB43O43298 467 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 REC8O95072 547 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 NR3C2P08235 984 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 MYL3P08590 195 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 MYCLP12524 364 aaPredicted RBP11.08□□□□□ -0.64
LINC01090-201ENST00000415357 CD46P15529 392 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
LINC01090-201ENST00000415357 CDK7P50613 346 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
LINC01090-201ENST00000415357 APOBRQ0VD83 1088 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 TTLL4Q14679 1199 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 STXBP2Q15833 593 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 LY6KQ17RY6 165 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 CCDC62Q6P9F0 684 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 USP17L6PQ6QN14 398 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 SYNE3Q6ZMZ3 975 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 Q6ZUG5 572 aa11.08□□□□□ -0.64
LINC01090-201ENST00000415357 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms