RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ID3Q02535 119 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 KIAA2012Q0VF49 1180 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 BNIP3Q12983 259 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 CDK5R2Q13319 367 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 SUSD4Q5VX71 490 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 MOB2Q70IA6 237 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 PPP1R42Q7Z4L9 355 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 NETO1Q8TDF5 533 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 RTF1Q92541 710 aaKnown RBP5.92□□□□□ -1.46
PTPRK-210ENST00000415055 WDR89Q96FK6 387 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-210ENST00000415055 ZC3H12CQ9C0D7 883 aaKnown RBP5.92□□□□□ -1.46
PTPRK-210ENST00000415055 ZSWIM4Q9H7M6 989 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 COPRSQ9NQ92 184 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 KBTBD4Q9NVX7 518 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 GPN3Q9UHW5 284 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-210ENST00000415055 SCN9AQ15858 1988 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 LAMB4A4D0S4 1761 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 ANKRD36CQ5JPF3 1778 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 ABCC4O15439 1325 aa5.92□□□□□ -1.46
PTPRK-210ENST00000415055 RIC1Q4ADV7 1423 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 DDX60Q8IY21 1712 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 ANKRD62A6NC57 917 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 ZNF862O60290 1169 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SSBP05455 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SOX9P48436 509 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 RPS26P62854 115 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 INTS3Q68E01 1043 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 DDX46Q7L014 1031 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 MCM10Q7L590 875 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 CCDC84Q86UT8 332 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SP8Q8IXZ3 490 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 PLD6Q8N2A8 252 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 DPF2Q92785 391 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 RTFDC1Q9BY42 306 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 KRT82Q9NSB4 513 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 SCAF8Q9UPN6 1271 aaKnown RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 ASTN2O75129 1339 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-210ENST00000415055 MAP3K15Q6ZN16 1313 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 UBN2Q6ZU65 1347 aa5.91□□□□□ -1.46
PTPRK-210ENST00000415055 ERVV-1B6SEH8 477 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 H0YGN5 161 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 PAGE1O75459 146 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 BBOX1O75936 387 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 NTSR2O95665 410 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 GSTP1P09211 210 aaKnown RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 HCLS1P14317 486 aaPredicted RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 FUT4P22083 530 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 RPS12P25398 132 aaKnown RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 NF2P35240 595 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 SREBF2Q12772 1141 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 PRKG1Q13976 671 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 SLC4A8Q2Y0W8 1093 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 ANGEL2Q5VTE6 544 aaKnown RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 PRAMEF18Q5VWM3 479 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 SDE2Q6IQ49 451 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 OTOP1Q7RTM1 612 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 ATG4DQ86TL0 474 aaPredicted RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 FAM181AQ8N9Y4 354 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 MRFAP1L1Q96HT8 127 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 UTP14AQ9BVJ6 771 aaKnown RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 R3HDMLQ9H3Y0 253 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 DISC1Q9NRI5 854 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 MIS18AQ9NYP9 233 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 VAV3Q9UKW4 847 aa5.9□□□□□ -1.46
PTPRK-210ENST00000415055 SUPT16HQ9Y5B9 1047 aaKnown RBP5.9□□□□□ -1.46
PTPRK-210ENST00000415055 MINDY4BA8MYZ0 360 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 ENC1O14682 589 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 ECE2O60344 883 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 CD8BP10966 210 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 GBP2P32456 591 aaPredicted RBP5.89□□□□□ -1.47
PTPRK-210ENST00000415055 TM4SF4P48230 202 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 FKBP1BP68106 108 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 PRKCQQ04759 706 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 TTLL4Q14679 1199 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 PARP10Q53GL7 1025 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 CC2D1BQ5T0F9 858 aaKnown RBP5.89□□□□□ -1.47
PTPRK-210ENST00000415055 NECAB3Q96P71 396 aaPredicted RBP5.89□□□□□ -1.47
PTPRK-210ENST00000415055 RC3H2Q9HBD1 1191 aaKnown RBP5.89□□□□□ -1.47
PTPRK-210ENST00000415055 MKNK2Q9HBH9 465 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 PCOLCE2Q9UKZ9 415 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 TLR6Q9Y2C9 796 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 PCDHGC5Q9Y5F6 944 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 DLG5Q8TDM6 1919 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 CEMIPQ8WUJ3 1361 aa5.89□□□□□ -1.47
PTPRK-210ENST00000415055 IBTKQ9P2D0 1353 aaPredicted RBP5.89□□□□□ -1.47
PTPRK-210ENST00000415055 GREM1O60565 184 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 RNGTTO60942 597 aaKnown RBP5.88□□□□□ -1.47
PTPRK-210ENST00000415055 HSD3B2P26439 372 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 PRKAR2BP31323 418 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 LMNB2Q03252 620 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 PPP2R3AQ06190 1150 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 SERINC3Q13530 473 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms