RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 COPS5Q92905 334 aa16.81■□□□□ 0.28
CHD1-202ENST00000414220 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
CHD1-202ENST00000414220 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
CHD1-202ENST00000414220 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
CHD1-202ENST00000414220 SPATA31C2B4DYI2 1134 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 PQBP1O60828 265 aaKnown RBP16.8■□□□□ 0.28
CHD1-202ENST00000414220 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 GGPS1O95749 300 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 TLE2Q04725 743 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 CELF3Q5SZQ8 465 aaKnown RBP16.8■□□□□ 0.28
CHD1-202ENST00000414220 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 AFG1LQ8WV93 481 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 KATNAL1Q9BW62 490 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 PRDM5Q9NQX1 630 aaPredicted RBP16.8■□□□□ 0.28
CHD1-202ENST00000414220 VPS54Q9P1Q0 977 aa16.8■□□□□ 0.28
CHD1-202ENST00000414220 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
CHD1-202ENST00000414220 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 PPFIA4O75335 1185 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 RGS20O76081 388 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 MMP3P08254 477 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 CLTBP09497 229 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
CHD1-202ENST00000414220 PURAQ00577 322 aaKnown RBP16.79■□□□□ 0.28
CHD1-202ENST00000414220 MTMR1Q13613 665 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 ME3Q16798 604 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 ANKRD33Q7Z3H0 272 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 GTF3C6Q969F1 213 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
CHD1-202ENST00000414220 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 TMEM39AQ9NV64 488 aa16.79■□□□□ 0.28
CHD1-202ENST00000414220 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 SUPT20HL2P0C7V6 817 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 SYN1P17600 705 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 UBA1P22314 1058 aaKnown RBP16.78■□□□□ 0.28
CHD1-202ENST00000414220 SREBF1P36956 1147 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
CHD1-202ENST00000414220 METTL7BQ6UX53 244 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 MXRA8Q9BRK3 442 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
CHD1-202ENST00000414220 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
CHD1-202ENST00000414220 PCDHA4Q9UN74 947 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 UBIAD1Q9Y5Z9 338 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 LRRC37A2A6NM11 1700 aa16.78■□□□□ 0.28
CHD1-202ENST00000414220 RAG1P15918 1043 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 PTGS1P23219 599 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 CDK7P50613 346 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 ARHGAP4P98171 946 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 PTPN11Q06124 597 aaPredicted RBP16.77■□□□□ 0.28
CHD1-202ENST00000414220 TRIM29Q14134 588 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 CEP55Q53EZ4 464 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 NECAB1Q8N987 351 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 SDF4Q9BRK5 362 aa16.77■□□□□ 0.28
CHD1-202ENST00000414220 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 NFRKBQ6P4R8 1299 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 CYFIP1Q7L576 1253 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 TCEAL9Q9UHQ7 104 aa16.76■□□□□ 0.27
CHD1-202ENST00000414220 SORBS3O60504 671 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 CYP3A4P08684 503 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 ITGB5P18084 799 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 MCM2P49736 904 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 PSMC6P62333 389 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
CHD1-202ENST00000414220 SP2Q02086 613 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 NIPA1Q7RTP0 329 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
CHD1-202ENST00000414220 ALG1Q9BT22 464 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 NOD1Q9Y239 953 aa16.75■□□□□ 0.27
CHD1-202ENST00000414220 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
CHD1-202ENST00000414220 USP11P51784 963 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 FAAP100Q0VG06 881 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 NBPF20Q3BBV1 942 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 HSDL1Q3SXM5 330 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 KRT25Q7Z3Z0 450 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 FAM126BQ8IXS8 530 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 C7orf31Q8N865 590 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 DAGLBQ8NCG7 672 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 KIF2CQ99661 725 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 KCNH7Q9NS40 1196 aa16.74■□□□□ 0.27
CHD1-202ENST00000414220 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
CHD1-202ENST00000414220 CCDC194A0A1B0GVG4 234 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 MEIS1O00470 390 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 BMP8BP34820 402 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 PSEN2P49810 448 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms