RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 CATIPQ7Z7H3 387 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 VSIG10LQ86VR7 867 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 HERC6Q8IVU3 1022 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 KAT2BQ92831 832 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 ASB2Q96Q27 587 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 MTA3Q9BTC8 594 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 RIOX1Q9H6W3 641 aa19.3■□□□□ 0.68
SF1-207ENST00000413951 EYSQ5T1H1 3165 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 PNMA6FA0A0J9YX94 578 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 CA3P07451 260 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 POU3F3P20264 500 aaPredicted RBP19.29■□□□□ 0.68
SF1-207ENST00000413951 PTK7Q13308 1070 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 MFSD10Q14728 455 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 PGM5Q15124 567 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 ADCK5Q3MIX3 580 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 CNKSR3Q6P9H4 555 aa19.29■□□□□ 0.68
SF1-207ENST00000413951 ABHD14A-ACY1A0A1B0GW23 586 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 TNFRSF10AO00220 468 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 HOXD8P13378 290 aaPredicted RBP19.28■□□□□ 0.68
SF1-207ENST00000413951 MYOGP15173 224 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 ANAPC15P60006 121 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 CCDC85BQ15834 202 aaPredicted RBP19.28■□□□□ 0.68
SF1-207ENST00000413951 KIAA0753Q2KHM9 967 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 CELF3Q5SZQ8 465 aaKnown RBP19.28■□□□□ 0.68
SF1-207ENST00000413951 MYSM1Q5VVJ2 828 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 ALG1Q9BT22 464 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 MLXIPQ9HAP2 919 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 HDAC6Q9UBN7 1215 aa19.28■□□□□ 0.68
SF1-207ENST00000413951 HAS3O00219 553 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 OPLAHO14841 1288 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 TLL1O43897 1013 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 CKBP12277 381 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 KIF5BP33176 963 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 NEK1Q96PY6 1258 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 PIGSQ96S52 555 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 ZBED2Q9BTP6 218 aa19.27■□□□□ 0.68
SF1-207ENST00000413951 EMSYQ7Z589 1322 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 GGPS1O95749 300 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 CXCL10P02778 98 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 HMGB1P09429 215 aaKnown RBP19.26■□□□□ 0.67
SF1-207ENST00000413951 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 HOXA13P31271 388 aaPredicted RBP19.26■□□□□ 0.67
SF1-207ENST00000413951 MCM5P33992 734 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 TROAPQ12815 778 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 IKBKEQ14164 716 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 TMTC2Q8N394 836 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 CTCFLQ8NI51 663 aaPredicted RBP19.26■□□□□ 0.67
SF1-207ENST00000413951 LZTS2Q9BRK4 669 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 BACH2Q9BYV9 841 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 TM6SF1Q9BZW5 370 aa19.26■□□□□ 0.67
SF1-207ENST00000413951 NOP56O00567 594 aaKnown RBP19.25■□□□□ 0.67
SF1-207ENST00000413951 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
SF1-207ENST00000413951 GNAQP50148 359 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 EXOSC10Q01780 885 aaKnown RBP19.25■□□□□ 0.67
SF1-207ENST00000413951 NEDD9Q14511 834 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 XRRA1Q6P2D8 792 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 FCHSD1Q86WN1 690 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 IGDCC4Q8TDY8 1250 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 PPP1R13LQ8WUF5 828 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 CUL5Q93034 780 aa19.25■□□□□ 0.67
SF1-207ENST00000413951 VCANP13611 3396 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 PRUNE2Q8WUY3 3088 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 MYH6P13533 1939 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 PRC1O43663 620 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 ZNF286BP0CG31 522 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 GNAT1P11488 350 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 UBA1P22314 1058 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 WDR5P61964 334 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 SKIV2LQ15477 1246 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 HSDL1Q3SXM5 330 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 DHX32Q7L7V1 743 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 MICALL1Q8N3F8 863 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 ARNTL2Q8WYA1 636 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 RRP36Q96EU6 259 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 TMEM87BQ96K49 555 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 JAKMIP1Q96N16 626 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 CTAGE1Q96RT6 745 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 SEC63Q9UGP8 760 aaKnown RBP19.24■□□□□ 0.67
SF1-207ENST00000413951 COG5Q9UP83 839 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
SF1-207ENST00000413951 KIAA1217Q5T5P2 1943 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 H3BRB1 525 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
SF1-207ENST00000413951 CAND2O75155 1236 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 RGS20O76081 388 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 DDAH1O94760 285 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 PSMA5P28066 241 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 TAP1Q03518 808 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 FBXL16Q8N461 479 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 GIMAP8Q8ND71 665 aaPredicted RBP19.23■□□□□ 0.67
SF1-207ENST00000413951 ADAMTS19Q8TE59 1207 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 DHX38Q92620 1227 aaKnown RBP19.23■□□□□ 0.67
SF1-207ENST00000413951 RAD9AQ99638 391 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 TUT1Q9H6E5 874 aaKnown RBP19.23■□□□□ 0.67
SF1-207ENST00000413951 ZSWIM6Q9HCJ5 1215 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms