RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 UBA1P22314 1058 aaKnown RBP21.62■■□□□ 1.05
TRIM56-202ENST00000412507 ADCY7P51828 1080 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 ANAPC15P60006 121 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 MYSM1Q5VVJ2 828 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 TDHQ8IZJ6 230 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 SEZ6LQ9BYH1 1024 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 EIF5BO60841 1220 aaKnown RBP21.61■■□□□ 1.05
TRIM56-202ENST00000412507 IFNAR1P17181 557 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 ICAM3P32942 547 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 CHMP4BP1P59074 171 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 SEMA3FQ13275 785 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 PKN1Q16512 942 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 NBPF20Q3BBV1 942 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 CELF3Q5SZQ8 465 aaKnown RBP21.61■■□□□ 1.05
TRIM56-202ENST00000412507 XRRA1Q6P2D8 792 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 ZNF274Q96GC6 653 aaPredicted RBP21.61■■□□□ 1.05
TRIM56-202ENST00000412507 SLC26A6Q9BXS9 759 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 TRPV6Q9H1D0 765 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 BCAS3Q9H6U6 928 aa21.61■■□□□ 1.05
TRIM56-202ENST00000412507 SPATA31C2B4DYI2 1134 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 B4GALT4O60513 344 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 TIMP1P01033 207 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
TRIM56-202ENST00000412507 STK3Q13188 491 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 DGKDQ16760 1214 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 PPTC7Q8NI37 304 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 PGBD1Q96JS3 809 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 RNF26Q9BY78 433 aaPredicted RBP21.6■■□□□ 1.05
TRIM56-202ENST00000412507 PPP1R12CQ9BZL4 782 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 ALDH8A1Q9H2A2 487 aaPredicted RBP21.6■■□□□ 1.05
TRIM56-202ENST00000412507 MLXIPQ9HAP2 919 aa21.6■■□□□ 1.05
TRIM56-202ENST00000412507 WDR81Q562E7 1941 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 FIBPO43427 364 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 HSDL1Q3SXM5 330 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 FAM47CQ5HY64 1035 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 NLRX1Q86UT6 975 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 KAT2BQ92831 832 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 SPATA33Q96N06 139 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 EHMT1Q9H9B1 1298 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 TMEM260Q9NX78 707 aa21.59■■□□□ 1.05
TRIM56-202ENST00000412507 TANC1Q9C0D5 1861 aa21.58■■□□□ 1.05
TRIM56-202ENST00000412507 TEX2Q8IWB9 1127 aa21.58■■□□□ 1.05
TRIM56-202ENST00000412507 ANO3Q9BYT9 981 aa21.58■■□□□ 1.05
TRIM56-202ENST00000412507 GLT8D2Q9H1C3 349 aa21.58■■□□□ 1.05
TRIM56-202ENST00000412507 TRMT13Q9NUP7 481 aaKnown RBP21.58■■□□□ 1.05
TRIM56-202ENST00000412507 SOX1O00570 391 aaPredicted RBP21.57■■□□□ 1.04
TRIM56-202ENST00000412507 FOSP01100 380 aaPredicted RBP21.57■■□□□ 1.04
TRIM56-202ENST00000412507 ZNF286BP0CG31 522 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 ITGB5P18084 799 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 CLK2P49760 499 aaKnown RBP21.57■■□□□ 1.04
TRIM56-202ENST00000412507 FPGSQ05932 587 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 NEDD9Q14511 834 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 JAKMIP3Q5VZ66 844 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 CYFIP1Q7L576 1253 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 GPRASP2Q96D09 838 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 IL17RAQ96F46 866 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 UBIAD1Q9Y5Z9 338 aa21.57■■□□□ 1.04
TRIM56-202ENST00000412507 CPLX1O14810 134 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 ADAMTS3O15072 1205 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 PPFIA4O75335 1185 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 HOXD8P13378 290 aaPredicted RBP21.56■■□□□ 1.04
TRIM56-202ENST00000412507 CYP2C18P33260 490 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 EPHB4P54760 987 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 C9orf50Q5SZB4 431 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 MFSD5Q6N075 450 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 CCDC12Q8WUD4 166 aaPredicted RBP21.56■■□□□ 1.04
TRIM56-202ENST00000412507 ALG1Q9BT22 464 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 ZMYND12Q9H0C1 365 aa21.56■■□□□ 1.04
TRIM56-202ENST00000412507 UMODL1Q5DID0 1318 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 ESYT2A0FGR8 921 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 ATP9AO75110 1047 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 CYP2C9P11712 490 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 PSEN2P49810 448 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 AK2P54819 239 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 PTPN11Q06124 597 aaPredicted RBP21.55■■□□□ 1.04
TRIM56-202ENST00000412507 SSRP1Q08945 709 aaKnown RBP21.55■■□□□ 1.04
TRIM56-202ENST00000412507 AP3B2Q13367 1082 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 SHHQ15465 462 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 C8orf34Q49A92 452 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 METTL7BQ6UX53 244 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 TRIM22Q8IYM9 498 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 SENP7Q9BQF6 1050 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 NOC4LQ9BVI4 516 aaKnown RBP21.55■■□□□ 1.04
TRIM56-202ENST00000412507 HIPK3Q9H422 1215 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 C6orf50Q9HD87 102 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 VPS54Q9P1Q0 977 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 TPCN1Q9ULQ1 816 aa21.55■■□□□ 1.04
TRIM56-202ENST00000412507 MYH9P35579 1960 aaKnown RBP21.55■■□□□ 1.04
TRIM56-202ENST00000412507 SZT2Q5T011 3432 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 GBF1Q92538 1859 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 NOP56O00567 594 aaKnown RBP21.54■■□□□ 1.04
TRIM56-202ENST00000412507 F2P00734 622 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 SUPT20HL2P0C7V6 817 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 MFSD10Q14728 455 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 LRIT3Q3SXY7 679 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 TET1Q8NFU7 2136 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 LRCH3Q96II8 777 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 CDHR1Q96JP9 859 aa21.54■■□□□ 1.04
TRIM56-202ENST00000412507 KATNAL1Q9BW62 490 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms