RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 GOLGA8NF8WBI6 632 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 Q9H521 79 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 RPF1Q9H9Y2 349 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 CREB3O43889 395 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 DYRK4Q9NR20 520 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 TPX2Q9ULW0 747 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 RNF40O75150 1001 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 KLC3Q6P597 504 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 MECOMQ03112 1051 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 KBTBD3Q8NAB2 608 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 MED7O43513 233 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 NNMTP40261 264 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.16□□□□□ -0.466e-6■□□□□ 11.1
PRPF40A-202ENST00000410080 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 PPARGP37231 505 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 TTC19Q6DKK2 380 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ATP6V0A1Q93050 837 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 TRIM67Q6ZTA4 783 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 CFAP61Q8NHU2 1237 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 LLPHQ9BRT6 129 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 SNAP25P60880 206 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 CHRNDQ07001 517 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ADCY1Q08828 1119 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 IMPG1Q17R60 797 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 MAP7D3Q8IWC1 876 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 FAM186BQ8IYM0 893 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 CABS1Q96KC9 395 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 CEP19Q96LK0 163 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 BRD1O95696 1058 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 TBX22Q9Y458 520 aa12.16□□□□□ -0.46
PRPF40A-202ENST00000410080 DDIT3P35638 169 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 CEP170P1Q96L14 293 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 CARD6Q9BX69 1037 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 MLH3Q9UHC1 1453 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ARL4AP40617 200 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 USP14P54578 494 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ART3Q13508 389 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 KRT40Q6A162 431 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 BAIAP2L1Q9UHR4 511 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 PPHLN1Q8NEY8 458 aaKnown RBP12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 PBXIP1Q96AQ6 731 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 NUDCD1Q96RS6 583 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 TOM1L1O75674 476 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 CROCCP2Q86T23 111 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 HADHAP40939 763 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 ATP1A2P50993 1020 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 SPOPLQ6IQ16 392 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 CCDC84Q86UT8 332 aaPredicted RBP12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 RAET1EQ8TD07 263 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 SH3KBP1Q96B97 665 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
PRPF40A-202ENST00000410080 MAPK4P31152 587 aa12.15□□□□□ -0.47
PRPF40A-202ENST00000410080 PIK3C2GO75747 1445 aa12.15□□□□□ -0.47
PRPF40A-202ENST00000410080 TTLL1O95922 423 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 HOXD10P28358 340 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 RIPOR2Q9Y4F9 1068 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 DNAJC6O75061 913 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 GNAT1P11488 350 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 PDXDC2PQ6P474 469 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 F5H423 210 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 MEIS1O00470 390 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ADAM9Q13443 819 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ERVV-2B6SEH9 535 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms