RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 MED7O43513 233 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 ELF2Q15723 593 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 BBOF1Q8ND07 529 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 MYL3P08590 195 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 CEP57Q86XR8 500 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 WRNIP1Q96S55 665 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 ZNF658Q5TYW1 1059 aaPredicted RBP27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 TDRD3Q9H7E2 651 aaKnown RBP27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 CDHR2Q9BYE9 1310 aa27.29■■□□□ 1.96
SPIRE1-202ENST00000409402 TCP1P17987 556 aaKnown RBP27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 ARPP19P56211 112 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 PLEKHA4Q9H4M7 779 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 ZHX2Q9Y6X8 837 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 PPFIA1Q13136 1202 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 AP3B2Q13367 1082 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 ZNF148Q9UQR1 794 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 VPS41P49754 854 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 SNAP25P60880 206 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 NR5A1Q13285 461 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 PTPROQ16827 1216 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 VSIG1Q86XK7 387 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 STRBPQ96SI9 672 aaKnown RBP27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 FEM1BQ9UK73 627 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 USP17L5A8MUK1 530 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 ALCAMQ13740 583 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 RFX6Q8HWS3 928 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 C17orf53Q8N3J3 647 aaPredicted RBP27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 EPSTI1Q96J88 318 aa27.28■■□□□ 1.96
SPIRE1-202ENST00000409402 CLIC2O15247 247 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 CYP19A1P11511 503 aaPredicted RBP27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 ATP11AP98196 1134 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 SH3GLB2Q9NR46 395 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 AXIN2Q9Y2T1 843 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 PPP2R2CQ9Y2T4 447 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 RGS16O15492 202 aaPredicted RBP27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 HOXA7P31268 230 aaPredicted RBP27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 FKBP3Q00688 224 aaKnown RBP27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 ELMSAN1Q6PJG2 1045 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 PLA2G4BP0C869 781 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 ATF2P15336 505 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 CPSF1Q10570 1443 aaKnown RBP27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 MCUR1Q96AQ8 359 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 PPP1R16BQ96T49 567 aa27.27■■□□□ 1.96
SPIRE1-202ENST00000409402 JAK3P52333 1124 aa27.26■■□□□ 1.96
SPIRE1-202ENST00000409402 SLFN14P0C7P3 912 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 MARK3P27448 753 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 PSMD2Q13200 908 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 TCP11Q8WWU5 503 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 MAN2A1Q16706 1144 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 FAM83BQ5T0W9 1011 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 GIMAP8Q8ND71 665 aaPredicted RBP27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 PPP4R1Q8TF05 950 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 TXNRD1Q16881 649 aa27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 RPF1Q9H9Y2 349 aaKnown RBP27.26■■□□□ 1.95
SPIRE1-202ENST00000409402 ANXA13P27216 316 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 CTNNA1P35221 906 aaKnown RBP27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 ARHGAP24Q8N264 748 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 TSC1Q92574 1164 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 MRFAP1L1Q96HT8 127 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 RPS6KA2Q15349 733 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 STXBP2Q15833 593 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 EEF2KMTQ96G04 330 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 SLC38A10Q9HBR0 1119 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 EPN1Q9Y6I3 576 aaPredicted RBP27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 EIF3CLB5ME19 914 aaKnown RBP27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 SRGAP2BP0DMP2 458 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 GNAT1P11488 350 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 STAG1Q8WVM7 1258 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 EIF3CQ99613 913 aaKnown RBP27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 NXF1Q9UBU9 619 aaKnown RBP27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 SRGAP2CP0DJJ0 459 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 RUNDC3BQ96NL0 473 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 EMILIN3Q9NT22 766 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 ESYT2A0FGR8 921 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 OSTNP61366 133 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 MESDQ14696 234 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 ANAPC5Q9UJX4 755 aa27.25■■□□□ 1.95
SPIRE1-202ENST00000409402 LRRC4Q9HBW1 653 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 GUCY2FP51841 1108 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 C7orf31Q8N865 590 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 PRDX5P30044 214 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 LMNB2Q03252 620 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 TTBK2Q6IQ55 1244 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 RILPQ96NA2 401 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 KIF9Q9HAQ2 790 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 CRB1P82279 1406 aa27.24■■□□□ 1.95
SPIRE1-202ENST00000409402 COBLO75128 1261 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 ANKRD20A3Q5VUR7 823 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 ZNF653Q96CK0 615 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 STX2P32856 288 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 GARSP41250 739 aaKnown RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 CELF1Q92879 486 aaKnown RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 NLRP4Q96MN2 994 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 CTTNQ14247 550 aaKnown RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 ADAT2Q7Z6V5 191 aaKnown RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 SCYL1Q96KG9 808 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 SLFN12LQ6IEE8 588 aa27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 RYBPQ8N488 228 aaPredicted RBP27.23■■□□□ 1.95
SPIRE1-202ENST00000409402 ANKRD42Q8N9B4 389 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms