RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
SHANK2-203ENST00000409161 STAT2P52630 851 aa13.11□□□□□ -0.31
SHANK2-203ENST00000409161 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■□□□□ 10.9
SHANK2-203ENST00000409161 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
SHANK2-203ENST00000409161 VPS54Q9P1Q0 977 aa13.11□□□□□ -0.31
SHANK2-203ENST00000409161 MRFAP1Q9Y605 127 aa13.11□□□□□ -0.31
SHANK2-203ENST00000409161 CCDC78A2IDD5 438 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 HNRNPRO43390 633 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 RWDD2BP57060 319 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 DR1Q01658 176 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 ACAD11Q709F0 780 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 WDR75Q8IWA0 830 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 DIABLOQ9NR28 239 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 PMLP29590 882 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 NEUROG2Q9H2A3 272 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 SCG2P13521 617 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 ATP5JP18859 108 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 TOM1L1O75674 476 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 RFX1P22670 979 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 MAN2A1Q16706 1144 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 USH1GQ495M9 461 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 VPS39Q96JC1 886 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 ABCC2Q92887 1545 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 RFX6Q8HWS3 928 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 SYT2Q8N9I0 419 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
SHANK2-203ENST00000409161 MYH6P13533 1939 aa13.1□□□□□ -0.31
SHANK2-203ENST00000409161 RASSF10A6NK89 507 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 TFDP1Q14186 410 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 SERPING1P05155 500 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 MED21Q13503 144 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 NCF2P19878 526 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 ME3Q16798 604 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DNAAF3Q8N9W5 541 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 POLD1P28340 1107 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 CASP8Q14790 479 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 KCTD6Q8NC69 237 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 KDM1AO60341 852 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 NT5C2P49902 561 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 FAM160B1Q5W0V3 765 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 PCDHB4Q9Y5E5 795 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 FOXP2O15409 715 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 APLFQ8IW19 511 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 TNRQ92752 1358 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 TBCCQ15814 346 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DDB1Q16531 1140 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
SHANK2-203ENST00000409161 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
SHANK2-203ENST00000409161 TJP3O95049 919 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 FKBP3Q00688 224 aaKnown RBP13.08□□□□□ -0.31
SHANK2-203ENST00000409161 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.31
SHANK2-203ENST00000409161 PSMD2Q13200 908 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 TCP11X2Q5H9J9 407 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 GLG1Q92896 1179 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
SHANK2-203ENST00000409161 H0Y626 953 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 TRIM16O95361 564 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 ARL4AP40617 200 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms