RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MDM2Q00987 491 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 FAAP100Q0VG06 881 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 CELF3Q5SZQ8 465 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 MYSM1Q5VVJ2 828 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 SLC43A3Q8NBI5 491 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 GDF15Q99988 308 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 SEZ6LQ9BYH1 1024 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 TMEM39AQ9NV64 488 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 ESYT2A0FGR8 921 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 TRIM43BA6NCK2 446 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 FIBPO43427 364 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 PFKFB2O60825 505 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 UBA1P22314 1058 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 SCRN1Q12765 414 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 TRIM43Q96BQ3 446 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 PGBD1Q96JS3 809 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 ZMYND12Q9H0C1 365 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 TMEM260Q9NX78 707 aa20.54■□□□□ 0.88
PDLIM2-206ENST00000409141 GNA11P29992 359 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 CLK2P49760 499 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 AP3B2Q13367 1082 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 DGKDQ16760 1214 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 HABP4Q5JVS0 413 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 JAKMIP3Q5VZ66 844 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 CCDC148Q8NFR7 591 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 PPTC7Q8NI37 304 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 SPATA33Q96N06 139 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 ANO3Q9BYT9 981 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 PRO3102Q9H379 93 aa20.53■□□□□ 0.88
PDLIM2-206ENST00000409141 CDKL5O76039 1030 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 DEXIO95424 95 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 CHMP4BP1P59074 171 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 SEMA3FQ13275 785 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 NEDD9Q14511 834 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 FAM126BQ8IXS8 530 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 GPRASP2Q96D09 838 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 UBIAD1Q9Y5Z9 338 aa20.52■□□□□ 0.88
PDLIM2-206ENST00000409141 KIAA0355O15063 1070 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 RAG1P15918 1043 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 ITGB5P18084 799 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 BMP8BP34820 402 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 NBPF20Q3BBV1 942 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 HSDL1Q3SXM5 330 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 CDHR1Q96JP9 859 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 C22orf23Q9BZE7 217 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 UBE2OQ9C0C9 1292 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 SH3GLB2Q9NR46 395 aa20.51■□□□□ 0.87
PDLIM2-206ENST00000409141 PPFIA4O75335 1185 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 NLRP5P59047 1200 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 FAM47CQ5HY64 1035 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 REXO1Q8N1G1 1221 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 BICD2Q8TD16 824 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 BADQ92934 168 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 SENP7Q9BQF6 1050 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 TRIOBPQ9H2D6 2365 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 CD4P01730 458 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 MTMR1Q13613 665 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 ME3Q16798 604 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 METTL7BQ6UX53 244 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 GIMAP8Q8ND71 665 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 PPP1R13LQ8WUF5 828 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 TRPV6Q9H1D0 765 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
PDLIM2-206ENST00000409141 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 ADAMTS3O15072 1205 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 MAFGO15525 162 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 ITGB8P26012 769 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 ZNF76P36508 570 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 SREBF1P36956 1147 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 NFRKBQ6P4R8 1299 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 KAT2BQ92831 832 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 MXRA8Q9BRK3 442 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 TBX21Q9UL17 535 aa20.49■□□□□ 0.87
PDLIM2-206ENST00000409141 MYH7BA7E2Y1 1941 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 B4GALT4O60513 344 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 ATP9AO75110 1047 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 LARGE1O95461 756 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 AIFM3Q96NN9 605 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
PDLIM2-206ENST00000409141 A0A1W2PPC1 479 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 DTNBO60941 627 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 TIMP1P01033 207 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 SUPT20HL2P0C7V6 817 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 HOXD8P13378 290 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 RBM25P49756 843 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 ARHGAP4P98171 946 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 SP4Q02446 784 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 CEP55Q53EZ4 464 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms