RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 GJD3Q8N144 294 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 DBF4BQ8NFT6 615 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 NEK9Q8TD19 979 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
TUBA3D-202ENST00000409047 GRXCR2A6NFK2 248 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 EFCAB14O75071 495 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 SP2Q02086 613 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 LAMC2Q13753 1193 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 COL19A1Q14993 1142 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 HSDL1Q3SXM5 330 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 ANKRD45Q5TZF3 282 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 ZNF318Q5VUA4 2279 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 MYSM1Q5VVJ2 828 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 SERINC5Q86VE9 423 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 C16orf70Q9BSU1 422 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 KATNAL1Q9BW62 490 aa15.3■□□□□ 0.04
TUBA3D-202ENST00000409047 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 PLEKHG4Q58EX7 1191 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 MCF2L2Q86YR7 1114 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 ENAHQ8N8S7 591 aaPredicted RBP15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 FBXO22Q8NEZ5 403 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 IL31RAQ8NI17 732 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 ESR2Q92731 530 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 INSL6Q9Y581 213 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 MRVI1Q9Y6F6 885 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
TUBA3D-202ENST00000409047 KDM4AO75164 1064 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 EPC2Q52LR7 807 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 PTCRAQ6ISU1 281 aaPredicted RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 FBXO11Q86XK2 927 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 DHX37Q8IY37 1157 aaKnown RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 RNF41Q9H4P4 317 aaPredicted RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 BCAS3Q9H6U6 928 aa15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
TUBA3D-202ENST00000409047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 B4E1Z4 1266 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 SORBS3O60504 671 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 CFBP00751 764 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 LINC00271P0C7V0 271 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 VSIG10LQ86VR7 867 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 MYOCDQ8IZQ8 938 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 ZSWIM5Q9P217 1185 aa15.27■□□□□ 0.04
TUBA3D-202ENST00000409047 EMSYQ7Z589 1322 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 RSPH10B2B2RC85 870 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 H3BNC9 293 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 GGPS1O95749 300 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 RSPH10BP0C881 870 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 THPOP40225 353 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 PGM5Q15124 567 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 TOP1MTQ969P6 601 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 VAT1LQ9HCJ6 419 aa15.26■□□□□ 0.03
TUBA3D-202ENST00000409047 ZNF213O14771 459 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 TREHO43280 583 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 AMHP03971 560 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 PARP1P09874 1014 aaKnown RBP15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 SDSP20132 328 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 LTBRP36941 435 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 ZP2Q05996 745 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 TCEAL5Q5H9L2 206 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 ALYREFQ86V81 257 aaKnown RBP15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 TELO2Q9Y4R8 837 aa15.25■□□□□ 0.03
TUBA3D-202ENST00000409047 USP34Q70CQ2 3546 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 SMIM10L2AP0DMW4 78 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 SMIM10L2BP0DMW5 78 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 NT5C2P49902 561 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 ADAM17P78536 824 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 SEC23AQ15436 765 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms