RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 HSD17B3P37058 310 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZAP70P43403 619 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GCLCP48506 637 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PAPOLAP51003 745 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 USP11P51784 963 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 COPS2P61201 443 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 IRX4P78413 519 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ELF3P78545 371 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 HDLBPQ00341 1268 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GUCY1A3Q02108 690 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLC1Q07866 573 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDE4DQ08499 809 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GOLGA8FQ08AF8 430 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GOLGA8DPQ0D2H9 430 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MKRN4PQ13434 485 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TCIRG1Q13488 830 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ACVR2BQ13705 512 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 BLMHQ13867 455 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDIA5Q14554 519 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KPNB1Q14974 876 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ASIC2Q16515 512 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GSTA3Q16772 222 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PFKFB3Q16875 520 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF827Q17R98 1081 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KRT71Q3SY84 523 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 LRRC23Q53EV4 343 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 HSP90AA4PQ58FG1 418 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 EPHA10Q5JZY3 1008 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 WASHC2DQ5SRD0 308 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 C6orf163Q5TEZ5 329 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SOGA3Q5TF21 947 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLHDC7AQ5VTJ3 777 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KCTD16Q68DU8 428 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CENPPQ6IPU0 288 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TYW1BQ6NUM6 668 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TTI2Q6NXR4 508 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDXDC2PQ6P474 469 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TLDC1Q6P9B6 456 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 WDR59Q6PJI9 974 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 LDHAL6AQ6ZMR3 332 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 UNC13DQ70J99 1090 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TRMT10CQ7L0Y3 403 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CYB5R4Q7L1T6 521 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CYFIP1Q7L576 1253 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PIGWQ7Z7B1 504 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RAB11FIP4Q86YS3 637 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 BLIDQ8IZY5 108 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 STAG2Q8N3U4 1231 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 UBL4BQ8N7F7 174 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZBTB38Q8NAP3 1195 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLHDC4Q8TBB5 520 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF483Q8TF39 744 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCFD2Q8WU76 684 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 NSMCE1Q8WV22 266 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 UBLCP1Q8WVY7 318 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 DYDC1Q8WWB3 177 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RIN2Q8WYP3 895 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SEC14L1Q92503 715 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANKS1AQ92625 1134 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 INPP5DQ92835 1189 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CNKSR1Q969H4 720 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ARL8AQ96BM9 186 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLHL29Q96CT2 875 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RRP36Q96EU6 259 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 FAXDC2Q96IV6 333 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MAML3Q96JK9 1138 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMEM237Q96Q45 408 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 XPO6Q96QU8 1125 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZSCAN10Q96SZ4 725 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 FMO2Q99518 471 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TSC22D3Q99576 134 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 BRIP1Q9BX63 1249 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHACTR1Q9C0D0 580 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PUS7LQ9H0K6 701 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 NT5C3AQ9H0P0 336 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GLT8D2Q9H1C3 349 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PABPC3Q9H361 631 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MMRN2Q9H8L6 949 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RXFP1Q9HBX9 757 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CD248Q9HCU0 757 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 UBN1Q9NPG3 1134 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CNNM1Q9NRU3 951 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 FAM217BQ9NTX9 383 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KBTBD4Q9NVX7 518 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 IL1RAPL1Q9NZN1 696 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 AIPL1Q9NZN9 384 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SENP1Q9P0U3 644 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLHL14Q9P2G3 628 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SUCLA2Q9P2R7 463 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 STOML1Q9UBI4 398 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 HDAC6Q9UBN7 1215 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC12A6Q9UHW9 1150 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 DMGDHQ9UI17 866 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCOCQ9UIL1 159 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMEM59LQ9UK28 342 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 FBXL5Q9UKA1 691 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 AMFRQ9UKV5 643 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms