RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PSEN2P49810 448 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 CCL23P55773 120 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 MFSD10Q14728 455 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 PTGISQ16647 500 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 SLC35G1Q2M3R5 365 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 ERICH6BQ5W0A0 696 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 SRBD1Q8N5C6 995 aaKnown RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 CCDC12Q8WUD4 166 aaPredicted RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 TIFAQ96CG3 184 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 SENP7Q9BQF6 1050 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 WNT8AQ9H1J5 351 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 ZNF215Q9UL58 517 aaPredicted RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 SLC4A7Q9Y6M7 1214 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 GOLGA8AA7E2F4 631 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 EFCAB14O75071 495 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 FOSP01100 380 aaPredicted RBP10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 ACRP10323 421 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 CYP2C9P11712 490 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 RXRAP19793 462 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 KIAA0753Q2KHM9 967 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 MCTP2Q6DN12 878 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 METTL7BQ6UX53 244 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 GPRASP2Q96D09 838 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 USP26Q9BXU7 913 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 LRRC2Q9BYS8 371 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
SNORD88A-201ENST00000408314 TANC1Q9C0D5 1861 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 UMODL1Q5DID0 1318 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 CNTNAP5Q8WYK1 1306 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 KLF18A0A0U1RQI7 1052 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 MEIS2O14770 477 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 MAFGO15525 162 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 RGS20O76081 388 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 BAIAP3O94812 1187 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 GNAT1P11488 350 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 FOSL2P15408 326 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 SELPP16109 830 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 HSPA4P34932 840 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 NAPAP54920 295 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 EXOSC10Q01780 885 aaKnown RBP10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 RBL2Q08999 1139 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 PTK7Q13308 1070 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 AP3B2Q13367 1082 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 USP17L6PQ6QN14 398 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 C16orf59Q7L2K0 433 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 SLC17A8Q8NDX2 589 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 KAT2BQ92831 832 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 TNPO1Q92973 898 aaKnown RBP10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 SCLYQ96I15 445 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 GUCD1Q96NT3 240 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 SLC9A7Q96T83 725 aa10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 FTOQ9C0B1 505 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 NAP1L2Q9ULW6 460 aaPredicted RBP10.42□□□□□ -0.74
SNORD88A-201ENST00000408314 EMSYQ7Z589 1322 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 KIF28PB7ZC32 967 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 H3BRB1 525 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 HAS3O00219 553 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 CAND2O75155 1236 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 LGALS2P05162 132 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 RPLP2P05387 115 aaKnown RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 IQCF3P0C7M6 154 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 ZNF286BP0CG31 522 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 KCNJ6P48051 423 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 ADCY7P51828 1080 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 HSDL1Q3SXM5 330 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 GDF6Q6KF10 455 aaPredicted RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 LRRC8DQ7L1W4 858 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 OTOP2Q7RTS6 562 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 CCDC82Q8N4S0 544 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 PHOSPHO2Q8TCD6 241 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 KCNB2Q92953 911 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 JAKMIP1Q96N16 626 aaKnown RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 GAS2L1Q99501 681 aaPredicted RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 ALG1Q9BT22 464 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 PBX4Q9BYU1 374 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 ZNF576Q9H609 170 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 SLC28A3Q9HAS3 691 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 HDAC6Q9UBN7 1215 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 PCDHA11Q9Y5I1 949 aa10.41□□□□□ -0.74
SNORD88A-201ENST00000408314 C17orf102A2RUQ5 167 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 ATP2A2P16615 1042 aaKnown RBP10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 MTMR1Q13613 665 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms