RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 KIAA1024Q9UPX6 916 aa14.04□□□□□ -0.16
RNF43-201ENST00000407977 ACTN1P12814 892 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
RNF43-201ENST00000407977 NUGGCQ68CJ6 796 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 CPXCR1Q8N123 301 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 YY1AP1Q9H869 796 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 RPS8P62241 208 aaKnown RBP14.03□□□□□ -0.16
RNF43-201ENST00000407977 SPARCL1Q14515 664 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 CCDC127Q96BQ5 260 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 TMEM206Q9H813 350 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 TADA3O75528 432 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
RNF43-201ENST00000407977 TTBK2Q6IQ55 1244 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 RFX6Q8HWS3 928 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 RUBCNQ92622 972 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 GPKOWQ92917 476 aaPredicted RBP eCLIP14.03□□□□□ -0.16
RNF43-201ENST00000407977 ADPGKQ9BRR6 497 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 MB21D1Q8N884 522 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 ABTB1Q969K4 478 aaPredicted RBP14.03□□□□□ -0.16
RNF43-201ENST00000407977 UPF3AQ9H1J1 476 aaKnown RBP14.03□□□□□ -0.16
RNF43-201ENST00000407977 NDST4Q9H3R1 872 aa14.03□□□□□ -0.16
RNF43-201ENST00000407977 MIF4GDA9UHW6 222 aaKnown RBP14.02□□□□□ -0.16
RNF43-201ENST00000407977 SPAG7O75391 227 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 CA4P22748 312 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 SYT2Q8N9I0 419 aaPredicted RBP14.02□□□□□ -0.16
RNF43-201ENST00000407977 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 MRPL46Q9H2W6 279 aaKnown RBP14.02□□□□□ -0.16
RNF43-201ENST00000407977 IVNS1ABPQ9Y6Y0 642 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 NFU1Q9UMS0 254 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 PLAAQ9Y263 795 aa14.02□□□□□ -0.16
RNF43-201ENST00000407977 MMEP08473 750 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 CXCR5P32302 372 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 CENPUQ71F23 418 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 TRIML2Q8N7C3 387 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 CAV1Q03135 178 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 DPP8Q6V1X1 898 aaPredicted RBP14.02□□□□□ -0.17
RNF43-201ENST00000407977 TRIM55Q9BYV6 548 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.17
RNF43-201ENST00000407977 M0QZ92 97 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 DRP2Q13474 957 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ART3Q13508 389 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 CLEC17AQ6ZS10 378 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 FAM133AQ8N9E0 248 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ACCSQ96QU6 501 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 TLK1Q9UKI8 766 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 LIFRP42702 1097 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 PDCLQ13371 301 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 RAPH1Q70E73 1250 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 PDIK1LQ8N165 341 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 POMGNT1Q8WZA1 660 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 GLG1Q92896 1179 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 DBNLQ9UJU6 430 aaKnown RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 GNGT2O14610 69 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 PYGBP11216 843 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 EEF1DP29692 281 aaKnown RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 TMED1Q13445 227 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ELAC2Q9BQ52 826 aaKnown RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 TRAIPQ9BWF2 469 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 TRIM15Q9C019 465 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 GINS2Q9Y248 185 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 GMNCA6NCL1 334 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 TRPA1O75762 1119 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 CHGBP05060 677 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 SLCO1A2P46721 670 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 KRT31Q15323 416 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ZNF449Q6P9G9 518 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 KIFC3Q9BVG8 833 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ANKFY1Q9P2R3 1169 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 S100BP04271 92 aaPredicted RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 SNX1Q13596 522 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ZYXQ15942 572 aaKnown RBP14.01□□□□□ -0.17
RNF43-201ENST00000407977 UNC5CLQ8IV45 518 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ATG3Q9NT62 314 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
RNF43-201ENST00000407977 ALCAMQ13740 583 aa14□□□□□ -0.17
RNF43-201ENST00000407977 SMYD4Q8IYR2 804 aaPredicted RBP14□□□□□ -0.17
RNF43-201ENST00000407977 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
RNF43-201ENST00000407977 SDR42E1Q8WUS8 393 aa14□□□□□ -0.17
RNF43-201ENST00000407977 MRPL40Q9NQ50 206 aaKnown RBP14□□□□□ -0.17
RNF43-201ENST00000407977 USP40Q9NVE5 1235 aa14□□□□□ -0.17
RNF43-201ENST00000407977 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
RNF43-201ENST00000407977 RWDD2BP57060 319 aa14□□□□□ -0.17
RNF43-201ENST00000407977 ALKBH5Q6P6C2 394 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms