RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 SFI1A8K8P3 1242 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 GAS7O60861 476 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 MB21D1Q8N884 522 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 CABS1Q96KC9 395 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 LRRC27Q9C0I9 530 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 PCDHAC2Q9Y5I4 1007 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 ORC4O43929 436 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 IFT88Q13099 833 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 COG1Q8WTW3 980 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 MYCBPQ99417 103 aaPredicted RBP17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 KCND1Q9NSA2 647 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 F5H6K3 240 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 KLRC3Q07444 240 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 ARFGAP2Q8N6H7 521 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 ZNF579Q8NAF0 562 aaKnown RBP17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 GINS2Q9Y248 185 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 CEP104O60308 925 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 SELENOSQ9BQE4 189 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 CCPG1Q9ULG6 757 aa17.28■□□□□ 0.36
CCDC85A-201ENST00000407595 ACTN4O43707 911 aaKnown RBP17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 ESYT3A0FGR9 886 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 LONP1P36776 959 aaKnown RBP17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 ERVK-24P63145 666 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 TNNC1P63316 161 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 PAK2Q13177 524 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 FAM83BQ5T0W9 1011 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 VPS36Q86VN1 386 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 JPH2Q9BR39 696 aaPredicted RBP17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 PSD3Q9NYI0 1048 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
CCDC85A-201ENST00000407595 GOLGA8KD6RF30 607 aa17.27■□□□□ 0.35
CCDC85A-201ENST00000407595 HGSO14964 777 aaPredicted RBP17.27■□□□□ 0.35
CCDC85A-201ENST00000407595 NTRK3Q16288 839 aa17.27■□□□□ 0.35
CCDC85A-201ENST00000407595 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.35
CCDC85A-201ENST00000407595 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 EHHADHQ08426 723 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 WDR19Q8NEZ3 1342 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 ABL1P00519 1130 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 TCP1P17987 556 aaKnown RBP17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 KRT12Q99456 494 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 SMARCAL1Q9NZC9 954 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 NNTQ13423 1086 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 QRICH1Q2TAL8 776 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 FBXW10Q5XX13 1052 aa17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
CCDC85A-201ENST00000407595 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 SLC9C1Q4G0N8 1177 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 EIF4A3P38919 411 aaKnown RBP17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 STAT3P40763 770 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 GRM4Q14833 912 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 MMS22LQ6ZRQ5 1243 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 FOXP2O15409 715 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 HEXIM1O94992 359 aaKnown RBP17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 ZNF18P17022 549 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 CYP2J2P51589 502 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 NFU1Q9UMS0 254 aa17.25■□□□□ 0.35
CCDC85A-201ENST00000407595 LOC102724159A0A0B4J2E5 919 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 NCK2O43639 380 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 EZRP15311 586 aaKnown RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 ARHGAP25P42331 645 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 PWP2Q15269 919 aaKnown RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 FTCDO95954 541 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 TBX2Q13207 712 aaPredicted RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 SRGNP10124 158 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 TRAPPC10P48553 1259 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 FAM26FQ5R3K3 315 aa17.24■□□□□ 0.35
CCDC85A-201ENST00000407595 LRRC1Q9BTT6 524 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms