RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 CETN3O15182 167 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 NT5C2P49902 561 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 FKBP3Q00688 224 aaKnown RBP13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ADAM9Q13443 819 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-204ENST00000406949 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 SLC9C1Q4G0N8 1177 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 HAUS3Q68CZ6 603 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TAF4BQ92750 862 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
PCNX4-204ENST00000406949 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 HERVK_113P62684 666 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 SFMBT2Q5VUG0 894 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 CRAMP1Q96RY5 1269 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 COL16A1Q07092 1604 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 GCNT3O95395 438 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 GFPT1Q06210 699 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 KLHL30Q0D2K2 578 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-204ENST00000406949 PNMA5Q96PV4 448 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 KDM3AQ9Y4C1 1321 aa13.15□□□□□ -0.3
PCNX4-204ENST00000406949 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
PCNX4-204ENST00000406949 GH2P01242 217 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 NPR1P16066 1061 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 NR2F2P24468 414 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 MCM3P25205 808 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 PDE6BP35913 854 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 VAV2P52735 878 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 DNAJC21Q5F1R6 531 aaKnown RBP13.14□□□□□ -0.31
PCNX4-204ENST00000406949 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 GUF1Q8N442 669 aaKnown RBP13.14□□□□□ -0.31
PCNX4-204ENST00000406949 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 DNAJC7Q99615 494 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
PCNX4-204ENST00000406949 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 NCK2O43639 380 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 CASP8Q14790 479 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 CCDC170Q8IYT3 715 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 CSRNP1Q96S65 589 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 AMNQ9BXJ7 453 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 H0YIN7 160 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 M0R2N6 131 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 FAM13AO94988 1023 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 LRRC63Q05C16 580 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
PCNX4-204ENST00000406949 SAMM50Q9Y512 469 aa13.14□□□□□ -0.31
PCNX4-204ENST00000406949 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 SHMT1P34896 483 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 TUBB4BP68371 445 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 NOX5Q96PH1 765 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 F5H6K3 240 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 RGL2O15211 777 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms