RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 SLC12A8A0AV02 714 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 ARNTLO00327 626 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 FSTP19883 344 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 CORO7P57737 925 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 GPR19Q15760 415 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 SKOR2Q2VWA4 1001 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 OTOP1Q7RTM1 612 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 CHPFQ8IZ52 775 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 CISD2Q8N5K1 135 aaKnown RBP6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 CHTF18Q8WVB6 975 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 EPB41L1Q9H4G0 881 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 PLAGL2Q9UPG8 496 aa6.28□□□□□ -1.4
HMGB3P18-201ENST00000406327 A0A1W2PQ45 241 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQY0 241 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 SHTN1A0MZ66 631 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 GOLGA6CA6NDK9 693 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 GOLGA6BA6NDN3 693 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 AKAP10O43572 662 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 HIP1RO75146 1068 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 DGKIO75912 1065 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 GOLGA6DP0CG33 693 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 FOSL1P15407 271 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 BCL6P41182 706 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 ID4P47928 161 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 DDB1Q16531 1140 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 MBLAC2Q68D91 279 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 Q8N1Y9 231 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 PLD6Q8N2A8 252 aaKnown RBP6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 SLC5A5Q92911 643 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 TRMT2BQ96GJ1 504 aaKnown RBP6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 AHCYL2Q96HN2 611 aaKnown RBP6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 FMNL2Q96PY5 1086 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 YIPF4Q9BSR8 244 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 CDH19Q9H159 772 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 ATP13A1Q9HD20 1204 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 GOLGA6AQ9NYA3 693 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZIM2Q9NZV7 527 aa6.27□□□□□ -1.41
HMGB3P18-201ENST00000406327 GABRDO14764 452 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 MAFKO60675 156 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CAND2O75155 1236 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 PRKD3O94806 890 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CFBP00751 764 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 ESR1P03372 595 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 KIR2DL1P43626 348 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 KIR2DL2P43627 348 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 RAB27AP51159 221 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 PRKCQQ04759 706 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CHRNA2Q15822 529 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 MROH9Q5TGP6 573 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CEP68Q76N32 757 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 NLGN4XQ8N0W4 816 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 SHISA5Q8N114 240 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 MYO1HQ8N1T3 1032 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 HOOK2Q96ED9 719 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 MAP6Q96JE9 813 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 KCNJ15Q99712 375 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 SLC13A1Q9BZW2 595 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CCDC8Q9H0W5 538 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 PCIF1Q9H4Z3 704 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 LUC7LQ9NQ29 371 aaKnown RBP6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 SPTLC3Q9NUV7 552 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 OXSMQ9NWU1 459 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 VAV3Q9UKW4 847 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZNF652Q9Y2D9 606 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 U3KQE9 123 aa6.26□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQ27 194 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQ64 194 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQC6 194 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQD8 194 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 WTIPA6NIX2 430 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 KRIT1O00522 736 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 PLIN1O60240 522 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 SNUPNO95149 360 aaKnown RBP6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 CT47B1P0C2W7 299 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 PDE6AP16499 860 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 CCND1P24385 295 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 LSP1P33241 339 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 PHC1P78364 1004 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 IRF9Q00978 393 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 KLF1Q13351 362 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 FIGNQ5HY92 759 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 NXNQ6DKJ4 435 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 HHIPL2Q6UWX4 724 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 RAVER1Q8IY67 606 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms