RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 TMEM59LQ9UK28 342 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 FBXL5Q9UKA1 691 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 JAG2Q9Y219 1238 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 FER1L6Q2WGJ9 1857 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 EIF3JO75822 258 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 TTLL1O95922 423 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 ACTN2P35609 894 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 KIF11P52732 1056 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 COASYQ13057 564 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 NNTQ13423 1086 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 EDRF1Q3B7T1 1238 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 GLE1Q53GS7 698 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 ARSHQ5FYA8 562 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 KLHDC7AQ5VTJ3 777 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 SIAH1Q8IUQ4 282 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 CCDC24Q8N4L8 307 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 ETNPPLQ8TBG4 499 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 DDX12PQ92771 950 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 SECISBP2LQ93073 1101 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 HPS3Q969F9 1004 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 PLIN2Q99541 437 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 SLC39A2Q9NP94 309 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 SEC63Q9UGP8 760 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 PCDHGC5Q9Y5F6 944 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 CAPN6Q9Y6Q1 641 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 MYH11P35749 1972 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 LOC285556D6RIA3 1793 aa4.29□□□□□ -1.72
RTN4-209ENST00000405240 ZNFX1Q9P2E3 1918 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 TNS1Q9HBL0 1735 aaKnown RBP4.29□□□□□ -1.72
RTN4-209ENST00000405240 ENC1O14682 589 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 ZBTB5O15062 677 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TBX3O15119 743 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SRGAP2O75044 1071 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GNA14O95837 355 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 RHOXF2BP0C7M4 288 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MYBL2P10244 700 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 RFC4P35249 363 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 HOXD13P35453 343 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 DDR1Q08345 913 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 FKBP15Q5T1M5 1219 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 TATDN1Q6P1N9 297 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 EIF1ADQ8N9N8 165 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 LENG9Q96B70 501 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GPR101Q96P66 508 aaPredicted RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 RHOXF2Q9BQY4 288 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TLR10Q9BXR5 811 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GLT8D2Q9H1C3 349 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GDF3Q9NR23 364 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SYNPO2Q9UMS6 1093 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 STX8Q9UNK0 236 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TRAF3IP3Q9Y228 551 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 ATP6V0A2Q9Y487 856 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 KDM3AQ9Y4C1 1321 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 ZNF185O15231 689 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 POLR3GO15318 223 aaPredicted RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 UFL1O94874 794 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SERPINB2P05120 415 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 CAPN2P17655 700 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TRIM21P19474 475 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 ANXA13P27216 316 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 CIITAP33076 1130 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 EIF4A3P38919 411 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 NAB2Q15742 525 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TMEM266Q2M3C6 531 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MFSD14BQ5SR56 506 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SOGA3Q5TF21 947 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 APOBEC3HQ6NTF7 200 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 FAM196AQ6ZSG2 479 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MREGQ8N565 214 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GLIS3Q8NEA6 775 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 COA7Q96BR5 231 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 BORCS6Q96GS4 357 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 OSBPL9Q96SU4 736 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 P2RX7Q99572 595 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 FGFBP2Q9BYJ0 223 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 NT5C3AQ9H0P0 336 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 ZSWIM4Q9H7M6 989 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 DNAJC18Q9H819 358 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 PLCB1Q9NQ66 1216 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 COL4A3BPQ9Y5P4 624 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SIP14410 1827 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 GRID2IPA4D2P6 1211 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 POTEMA6NI47 508 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MEIS2O14770 477 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 SERPING1P05155 500 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 CYP3A4P08684 503 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TCP1P17987 556 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 TXKP42681 527 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MTIF2P46199 727 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 JAM2P57087 298 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 FKBP3Q00688 224 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 TSR1Q2NL82 804 aaKnown RBP4.28□□□□□ -1.72
RTN4-209ENST00000405240 MAP9Q49MG5 647 aa4.28□□□□□ -1.72
RTN4-209ENST00000405240 MEI1Q5TIA1 1274 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms