RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 NEK4P51957 841 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 PTPN11Q06124 597 aaPredicted RBP13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 DGKDQ16760 1214 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 AFG1LQ8WV93 481 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 COPS5Q92905 334 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 PHKBQ93100 1093 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 GDF15Q99988 308 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
AC007249.1-201ENST00000404616 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 PQBP1O60828 265 aaKnown RBP13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 MMP3P08254 477 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 MYL3P08590 195 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 HOXD8P13378 290 aaPredicted RBP13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 SYN1P17600 705 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 AK2P54819 239 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 UBE2SQ16763 222 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 GALNT17Q6IS24 598 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 NFRKBQ6P4R8 1299 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 UPF2Q9HAU5 1272 aaKnown RBP13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 PDLIM7Q9NR12 457 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 UBIAD1Q9Y5Z9 338 aa13.38□□□□□ -0.27
AC007249.1-201ENST00000404616 KAT6AQ92794 2004 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 GGPS1O95749 300 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 SUPT20HL2P0C7V6 817 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 PTGS1P23219 599 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 SREBF1P36956 1147 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 SCRN1Q12765 414 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 STK3Q13188 491 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 FAM126BQ8IXS8 530 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 RTEL1Q9NZ71 1219 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 STK36Q9NRP7 1315 aa13.37□□□□□ -0.27
AC007249.1-201ENST00000404616 CD4P01730 458 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 XBP1P17861 261 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 SP2Q02086 613 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 MTMR1Q13613 665 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 WASF1Q92558 559 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
AC007249.1-201ENST00000404616 LTBP2Q14767 1821 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 TIMP1P01033 207 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 CYP3A4P08684 503 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 RAG1P15918 1043 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 ITGB5P18084 799 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 NLRP5P59047 1200 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 SEMA3FQ13275 785 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
AC007249.1-201ENST00000404616 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 MEIS1O00470 390 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 F2P00734 622 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 ZNF76P36508 570 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 PSMC6P62333 389 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 ARHGAP4P98171 946 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 ME3Q16798 604 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 HSDL1Q3SXM5 330 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 CYFIP1Q7L576 1253 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 SH3RF1Q7Z6J0 888 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 DAGLBQ8NCG7 672 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 CRYGNQ8WXF5 182 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 UBE2OQ9C0C9 1292 aaKnown RBP13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 VPS54Q9P1Q0 977 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 PCDHA4Q9UN74 947 aa13.34□□□□□ -0.27
AC007249.1-201ENST00000404616 HAS3O00219 553 aa13.33□□□□□ -0.28
AC007249.1-201ENST00000404616 KCNA2P16389 499 aa13.33□□□□□ -0.28
AC007249.1-201ENST00000404616 USP11P51784 963 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms