RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 FGAP02671 866 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 IRS1P35568 1242 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ALX1Q15699 326 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 RRP12Q5JTH9 1297 aaKnown RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MYOCDQ8IZQ8 938 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 BANK1Q8NDB2 785 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PABPC5Q96DU9 382 aaKnown RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PARNO95453 639 aaKnown RBP13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SP2Q02086 613 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DGKDQ16760 1214 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SERINC5Q86VE9 423 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TBC1D10CQ8IV04 446 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PRSS33Q8NF86 280 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SNX27Q96L92 541 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 FAM227BQ96M60 508 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 COL4A6Q14031 1691 aa13.97□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MYH6P13533 1939 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 EFCAB14O75071 495 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HOXC8P31273 242 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HAND2P61296 217 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GPM6BQ13491 265 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 CTC1Q2NKJ3 1217 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 IER5LQ5T953 404 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ADHFE1Q8IWW8 467 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PPTC7Q8NI37 304 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MUTYHQ9UIF7 546 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TELO2Q9Y4R8 837 aa13.96□□□□□ -0.17
SPTLC1P3-201ENST00000403408 BAZ2BQ9UIF8 2168 aaKnown RBP13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 A0A0D9SFI3 127 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 THPOP40225 353 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 STXBP2Q15833 593 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 CLUL1Q15846 466 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 FBXO11Q86XK2 927 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 MIER1Q8N108 512 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 IL31RAQ8NI17 732 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 ZKSCAN3Q9BRR0 538 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 TOMM22Q9NS69 142 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 PCDHB15Q9Y5E8 787 aa13.95□□□□□ -0.18
SPTLC1P3-201ENST00000403408 NEDD4P46934 1319 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 FAM186AA6NE01 2351 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 RSPH10B2B2RC85 870 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 GRM6O15303 877 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 TREHO43280 583 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 UPP2O95045 317 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 AMHP03971 560 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 NR3C2P08235 984 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 RSPH10BP0C881 870 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 HYAL1Q12794 435 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 RALGAPA2Q2PPJ7 1873 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 MYSM1Q5VVJ2 828 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 IWS1Q96ST2 819 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 NSUN3Q9H649 340 aaKnown RBP13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 DOCK5Q9H7D0 1870 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 CLDND1Q9NY35 253 aa13.94□□□□□ -0.18
SPTLC1P3-201ENST00000403408 ABCB11O95342 1321 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 LINC01565O15544 149 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 MBTPS2O43462 519 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 TBX10O75333 385 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 EIF3JO75822 258 aaKnown RBP13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 LAMC2Q13753 1193 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 CAMK1Q14012 370 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 PTPROQ16827 1216 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 KCNH6Q9H252 994 aa13.93□□□□□ -0.18
SPTLC1P3-201ENST00000403408 RC3H2Q9HBD1 1191 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms