RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 BRD3Q15059 726 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 LARP4BQ92615 738 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 HSPD1P10809 573 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 KCNA4P22459 653 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 NFX1Q12986 1120 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 CNOT6LQ96LI5 555 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 CCDC138Q96M89 665 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 PPP1R9AQ9ULJ8 1098 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 FAF1Q9UNN5 650 aaPredicted RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 SERPINB2P05120 415 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 MYL3P08590 195 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 SNX1Q13596 522 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 FBXL13Q8NEE6 735 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 SFMBT1Q9UHJ3 866 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
NRXN1-204ENST00000401669 CIITAP33076 1130 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 MSH2P43246 934 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 TMTC3Q6ZXV5 915 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
NRXN1-204ENST00000401669 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 TMEM247A6NEH6 219 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 BMP3P12645 472 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 ABCD1P33897 745 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 PCGF5Q86SE9 256 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
NRXN1-204ENST00000401669 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
NRXN1-204ENST00000401669 ZNF18P17022 549 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 PPP1R2P3Q6NXS1 205 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 TMEM206Q9H813 350 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
NRXN1-204ENST00000401669 SLC16A2P36021 539 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 STAT2P52630 851 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 SPATA1Q5VX52 437 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 CLIC6Q96NY7 704 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 CD58P19256 250 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
NRXN1-204ENST00000401669 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
NRXN1-204ENST00000401669 LRRN2O75325 713 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 FGAP02671 866 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.38
NRXN1-204ENST00000401669 SETSIPP0DME0 302 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 PHKG2P15735 406 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 IFNA8P32881 189 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.38
NRXN1-204ENST00000401669 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 TRIM67Q6ZTA4 783 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 TMC4Q7Z404 712 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 SZRD1Q7Z422 152 aa17.39■□□□□ 0.38
NRXN1-204ENST00000401669 FAM49AQ9H0Q0 323 aaPredicted RBP17.39■□□□□ 0.38
NRXN1-204ENST00000401669 RPF1Q9H9Y2 349 aaKnown RBP17.39■□□□□ 0.38
NRXN1-204ENST00000401669 EFCAB8A8MWE9 144 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 MAP3K7O43318 606 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 CHEK2O96017 543 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 GUCY2DQ02846 1103 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 SGO2Q562F6 1265 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 ZBTB41Q5SVQ8 909 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 TTI1O43156 1089 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 PSAPP07602 524 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 NEMP1O14524 444 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 CMA1P23946 247 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 MRPL47Q9HD33 250 aaKnown RBP17.39■□□□□ 0.37
NRXN1-204ENST00000401669 PNMA3Q9UL41 463 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
NRXN1-204ENST00000401669 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 CLIC2O15247 247 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 SRGAP2CP0DJJ0 459 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 NPR1P16066 1061 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 MARK3P27448 753 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 YWHAHQ04917 246 aaPredicted RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 EFHD1Q9BUP0 239 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 SPZ1Q9BXG8 430 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 GREM2Q9H772 168 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 LAD1O00515 517 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 ESRRBO95718 433 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 RWDD4Q6NW29 188 aaKnown RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 PFKFB2O60825 505 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 PHKA1P46020 1223 aa17.38■□□□□ 0.37
NRXN1-204ENST00000401669 DALRD3Q5D0E6 543 aaKnown RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
NRXN1-204ENST00000401669 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms