RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ANKRD40Q6AI12 368 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 DYMQ7RTS9 669 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 CATSPER3Q86XQ3 398 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SCYL3Q8IZE3 742 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
CLIP4-203ENST00000401617 ERMNQ8TAM6 284 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SLC5A5Q92911 643 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SRRTQ9BXP5 876 aaKnown RBP13.69□□□□□ -0.22
CLIP4-203ENST00000401617 PPP2R3BQ9Y5P8 575 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 RPTORQ8N122 1335 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 E9PMD0 336 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 ZNF76P36508 570 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 HPS3Q969F9 1004 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 TRIM47Q96LD4 638 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 RABGAP1Q9Y3P9 1069 aa13.69□□□□□ -0.22
CLIP4-203ENST00000401617 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 MEIS1O00470 390 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 N4BP3O15049 544 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 STX10O60499 249 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 PSMD10O75832 226 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 FDX1P10109 184 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 VCAM1P19320 739 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 HIRAP54198 1017 aaPredicted RBP13.68□□□□□ -0.22
CLIP4-203ENST00000401617 SLC12A3P55017 1021 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 BACE1P56817 501 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 GOLGA8FQ08AF8 430 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 GOLGA8DPQ0D2H9 430 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 TAB2Q9NYJ8 693 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
CLIP4-203ENST00000401617 PNMA2Q9UL42 364 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 CYP11B2P19099 503 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 PPP2R5CQ13362 524 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 MTMR2Q13614 643 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 CEP55Q53EZ4 464 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 CSGALNACT2Q8N6G5 542 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 ZNF507Q8TCN5 953 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 C12orf42Q96LP6 360 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
CLIP4-203ENST00000401617 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
CLIP4-203ENST00000401617 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 AKR1B15C9JRZ8 316 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-203ENST00000401617 TPM2P07951 284 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 PTPRAP18433 802 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 FECHP22830 423 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
CLIP4-203ENST00000401617 COASYQ13057 564 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 DGKZQ13574 1117 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 NCAPH2Q6IBW4 605 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-203ENST00000401617 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-203ENST00000401617 VPS16Q9H269 839 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
CLIP4-203ENST00000401617 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-203ENST00000401617 A0A1W2PQC6 194 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 EML1O00423 815 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 TNNT1P13805 278 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 RBL2Q08999 1139 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 SPP2Q13103 211 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 GPBP1Q86WP2 473 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 MCF2L2Q86YR7 1114 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 FAM114A1Q8IWE2 563 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 ZNF280CQ8ND82 737 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 RPAP3Q9H6T3 665 aaPredicted RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 LOXHD1Q8IVV2 1947 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 NFIBO00712 420 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 GYPCP04921 128 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 BCRP11274 1271 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 IDEP14735 1019 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 MUTP22033 750 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 EPS15P42566 896 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms