RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CDC25BP30305 580 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 SETQ01105 290 aaPredicted RBP28.73■■■□□ 2.19
CPNE1-205ENST00000401607 POTEBQ6S5H4 581 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 NSMFQ6X4W1 530 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 MXRA8Q9BRK3 442 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 TEX13BQ9BXU2 312 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 GDAQ9Y2T3 454 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 PSMD10O75832 226 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 ARP10275 920 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 ATP1A3P13637 1013 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 SEMA3FQ13275 785 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 SPC24Q8NBT2 197 aa28.73■■■□□ 2.19
CPNE1-205ENST00000401607 MYMKA6NI61 221 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 CXCL11O14625 94 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 HAUS3Q68CZ6 603 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 KLHL10Q6JEL2 608 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 POTEEQ6S8J3 1075 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 GADL1Q6ZQY3 521 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 ARMC9Q7Z3E5 817 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 PROCA1Q8NCQ7 364 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-205ENST00000401607 KCNH4Q9UQ05 1017 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 NFE2L3Q9Y4A8 694 aa28.72■■■□□ 2.19
CPNE1-205ENST00000401607 ITGB5P18084 799 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 ASIC1P78348 528 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 PPIL2Q13356 520 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 PCNX4Q63HM2 1172 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 ERMNQ8TAM6 284 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 KIAA1024Q9UPX6 916 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 CLEC11AQ9Y240 323 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 SYNRGQ9UMZ2 1314 aa28.71■■■□□ 2.19
CPNE1-205ENST00000401607 HOXA7P31268 230 aaPredicted RBP28.7■■■□□ 2.19
CPNE1-205ENST00000401607 BAATQ14032 418 aaPredicted RBP28.7■■■□□ 2.19
CPNE1-205ENST00000401607 LRCH2Q5VUJ6 765 aa28.7■■■□□ 2.19
CPNE1-205ENST00000401607 OTOP1Q7RTM1 612 aa28.7■■■□□ 2.19
CPNE1-205ENST00000401607 CATSPER3Q86XQ3 398 aa28.7■■■□□ 2.19
CPNE1-205ENST00000401607 EML1O00423 815 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 SPATA31C1P0DKV0 1188 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 MRPS9P82933 396 aaKnown RBP28.7■■■□□ 2.18
CPNE1-205ENST00000401607 TKFCQ3LXA3 575 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 LDLRAD1Q5T700 205 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 PURBQ96QR8 312 aaKnown RBP28.7■■■□□ 2.18
CPNE1-205ENST00000401607 UBIAD1Q9Y5Z9 338 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 STK24Q9Y6E0 443 aa28.7■■■□□ 2.18
CPNE1-205ENST00000401607 E9PMD0 336 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 BCRP11274 1271 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 ZNF18P17022 549 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 EIF2AK2P19525 551 aaKnown RBP28.69■■■□□ 2.18
CPNE1-205ENST00000401607 RPA1P27694 616 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 STX17P56962 302 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 FANCCQ00597 558 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 PPP2R5CQ13362 524 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 PGM5Q15124 567 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 MAP1SQ66K74 1059 aaPredicted RBP28.69■■■□□ 2.18
CPNE1-205ENST00000401607 CNNM4Q6P4Q7 775 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 LBX2Q6XYB7 198 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 NIPA1Q7RTP0 329 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 GIMAP8Q8ND71 665 aaPredicted RBP28.69■■■□□ 2.18
CPNE1-205ENST00000401607 OPTNQ96CV9 577 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 ZNF577Q9BSK1 485 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 PXMP2Q9NR77 195 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 IFNKQ9P0W0 207 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 CTNND2Q9UQB3 1225 aa28.69■■■□□ 2.18
CPNE1-205ENST00000401607 TRAF5O00463 557 aa28.68■■■□□ 2.18
CPNE1-205ENST00000401607 PRCPP42785 496 aa28.68■■■□□ 2.18
CPNE1-205ENST00000401607 RMDN3Q96TC7 470 aa28.68■■■□□ 2.18
CPNE1-205ENST00000401607 PDCD2LQ9BRP1 358 aa28.68■■■□□ 2.18
CPNE1-205ENST00000401607 POTEFA5A3E0 1075 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 PLS1Q14651 629 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 SPATA1Q5VX52 437 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 POTEGQ6S5H5 508 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 XPO4Q9C0E2 1151 aaKnown RBP28.67■■■□□ 2.18
CPNE1-205ENST00000401607 ACAD9Q9H845 621 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 PDE4DQ08499 809 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 MOGSQ13724 837 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 B3GNT9Q6UX72 402 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 ADSSL1Q8N142 457 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 EIF2AK1Q9BQI3 630 aaKnown RBP28.67■■■□□ 2.18
CPNE1-205ENST00000401607 WDR11Q9BZH6 1224 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 LRRC27Q9C0I9 530 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 EXOC1Q9NV70 894 aa28.67■■■□□ 2.18
CPNE1-205ENST00000401607 GAS7O60861 476 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 UNC13DQ70J99 1090 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 DYMQ7RTS9 669 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 DRC7Q8IY82 874 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 CCDC47Q96A33 483 aaKnown RBP28.66■■■□□ 2.18
CPNE1-205ENST00000401607 POLR3CQ9BUI4 534 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-205ENST00000401607 JADE2Q9NQC1 790 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 KCNH7Q9NS40 1196 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 SAMSN1Q9NSI8 373 aaKnown RBP28.66■■■□□ 2.18
CPNE1-205ENST00000401607 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.66■■■□□ 2.18
CPNE1-205ENST00000401607 RWDD2AQ9UIY3 292 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 MAPK8IP1Q9UQF2 711 aa28.66■■■□□ 2.18
CPNE1-205ENST00000401607 ESPNB1AK53 854 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 IPO5O00410 1097 aaKnown RBP28.65■■■□□ 2.18
CPNE1-205ENST00000401607 PLA2G4BP0C869 781 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 PAK1Q13153 545 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 ZSCAN30Q86W11 494 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 DDX12PQ92771 950 aa28.65■■■□□ 2.18
CPNE1-205ENST00000401607 A1CFQ9NQ94 594 aaKnown RBP28.65■■■□□ 2.18
CPNE1-205ENST00000401607 BTBD7Q9P203 1132 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms