RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CHURC1Q8WUH1 139 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PCDHA4Q9UN74 947 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PNMA6AP0CW24 399 aaPredicted RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MKRN3Q13064 507 aaKnown RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MTF1Q14872 753 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KRT31Q15323 416 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TREML2Q5T2D2 321 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CATSPERGQ6ZRH7 1159 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FAM160B2Q86V87 743 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 C4orf32Q8N8J7 132 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 BLZF1Q9H2G9 400 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CPVLQ9H3G5 476 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 AGTPBP1Q9UPW5 1226 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KIF5CO60282 957 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RPN1P04843 607 aaKnown RBP17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SLC16A2P36021 539 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SEMA3FQ13275 785 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TERF2Q15554 542 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GADL1Q6ZQY3 521 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCDC12Q8WUD4 166 aaPredicted RBP17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 STAMQ92783 540 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
CHRFAM7A-203ENST00000401522 N4BP3O15049 544 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GYPCP04921 128 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CASP14P31944 242 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 DEFB115Q30KQ5 88 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GPAT2Q6NUI2 795 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ZNF771Q7L3S4 317 aaPredicted RBP17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TMTC1Q8IUR5 882 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ADGRF4Q8IZF3 695 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PRPF38AQ8NAV1 312 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 DAGLBQ8NCG7 672 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CPLX3Q8WVH0 158 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 NELFBQ8WX92 580 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GOLGA1Q92805 767 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MTRQ99707 1265 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 STAT6P42226 847 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 COPB1P53618 953 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 COG2Q14746 738 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCL15Q16663 113 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MTMR8Q96EF0 704 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FLOT1O75955 427 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MYL1P05976 194 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 INHBEP58166 350 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SLC45A1Q9Y2W3 748 aa17.79■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KCNJ18B7U540 433 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 M0R2N6 131 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CCT6AP40227 531 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KCNJ12Q14500 433 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 JAKMIP3Q5VZ66 844 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 WWC2Q6AWC2 1192 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 DTHD1Q6ZMT9 781 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 HOXC10Q9NYD6 342 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 LAD1O00515 517 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 KCNB1Q14721 858 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TEX35Q5T0J7 233 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ANKRD23Q86SG2 305 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GPKOWQ92917 476 aaPredicted RBP eCLIP17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RRP36Q96EU6 259 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PTPN18Q99952 460 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms