RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IGHDP01880 384 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
LINC00544-201ENST00000400540 HSD17B4P51659 736 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 PTK7Q13308 1070 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
LINC00544-201ENST00000400540 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
LINC00544-201ENST00000400540 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00544-201ENST00000400540 HLA-CQ95604 372 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 PDCD2LQ9BRP1 358 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 KATNAL1Q9BW62 490 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 MAF1Q9H063 256 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
LINC00544-201ENST00000400540 LOXHD1Q8IVV2 1947 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
LINC00544-201ENST00000400540 SP2Q02086 613 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 LAMC2Q13753 1193 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 IMMTQ16891 758 aaKnown RBP13.88□□□□□ -0.19
LINC00544-201ENST00000400540 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC00544-201ENST00000400540 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 AMNQ9BXJ7 453 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 OSBPL3Q9H4L5 887 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 SUGCTQ9HAC7 445 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
LINC00544-201ENST00000400540 ABHD14A-ACY1A0A1B0GW23 586 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 GGPS1O95749 300 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
LINC00544-201ENST00000400540 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
LINC00544-201ENST00000400540 PLA2G5P39877 138 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 NT5C2P49902 561 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 GHRHRQ02643 423 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 NUCB1Q02818 461 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 PGM5Q15124 567 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 SEC23AQ15436 765 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
LINC00544-201ENST00000400540 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 MTMR8Q96EF0 704 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 RAD9AQ99638 391 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 KRT23Q9C075 422 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
LINC00544-201ENST00000400540 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 ZBTB5O15062 677 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 LGR5O75473 907 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
LINC00544-201ENST00000400540 ERVK-21P61565 698 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
LINC00544-201ENST00000400540 IKBKEQ14164 716 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 CELF3Q5SZQ8 465 aaKnown RBP13.86□□□□□ -0.19
LINC00544-201ENST00000400540 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
LINC00544-201ENST00000400540 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 C16orf70Q9BSU1 422 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 C1QTNF1Q9BXJ1 281 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 OSBPL7Q9BZF2 842 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
LINC00544-201ENST00000400540 CD320Q9NPF0 282 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 PCDHA1Q9Y5I3 950 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 WDFY4Q6ZS81 3184 aa13.86□□□□□ -0.19
LINC00544-201ENST00000400540 TRIOO75962 3097 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
LINC00544-201ENST00000400540 THPOP40225 353 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 VSIG10LQ86VR7 867 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 PIGSQ96S52 555 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 LRFN3Q9BTN0 628 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 CNNM2Q9H8M5 875 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 LMCD1Q9NZU5 365 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 COL4A6Q14031 1691 aa13.85□□□□□ -0.19
LINC00544-201ENST00000400540 FAM86C2PA6NEL3 165 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 HIP1O00291 1037 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 PPFIA4O75335 1185 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 FAM122AQ96E09 287 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
LINC00544-201ENST00000400540 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 TELO2Q9Y4R8 837 aa13.84□□□□□ -0.19
LINC00544-201ENST00000400540 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 RSPH10B2B2RC85 870 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 TREHO43280 583 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 CYTH3O43739 400 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 EFCAB14O75071 495 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 LGALS2P05162 132 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 CTSHP09668 335 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 RSPH10BP0C881 870 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 SMIM10L2AP0DMW4 78 aa13.83□□□□□ -0.2
LINC00544-201ENST00000400540 SMIM10L2BP0DMW5 78 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms