RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 NCOA5Q9HCD5 579 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 TRMT13Q9NUP7 481 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 RANBP2P49792 3224 aaKnown RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 UMODL1Q5DID0 1318 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 TRIP12Q14669 1992 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 hCG_1984214I3L0E3 225 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 NOP56O00567 594 aaKnown RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 FIBPO43427 364 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 STAM2O75886 525 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 SLC34A2O95436 690 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 CYP2C9P11712 490 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 SCG2P13521 617 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 CYP2C18P33260 490 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 MRPS9P82933 396 aaKnown RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 LAMC2Q13753 1193 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 TOB2Q14106 344 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 DGKDQ16760 1214 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 NBPF20Q3BBV1 942 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 KCNV1Q6PIU1 500 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 NLRX1Q86UT6 975 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 ZNF713Q8N859 430 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 ALG1Q9BT22 464 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 ALDH8A1Q9H2A2 487 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 HIPK3Q9H422 1215 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
USP16-202ENST00000399973 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 TMEM260Q9NX78 707 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 BARHL2Q9NY43 387 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 PCDHA6Q9UN73 950 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 PCDHA8Q9Y5H6 950 aa9.65□□□□□ -0.86
USP16-202ENST00000399973 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 CPLX1O14810 134 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 TIMP1P01033 207 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 CD4P01730 458 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 PDIA3P30101 505 aaKnown RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 PSEN2P49810 448 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 EPHB4P54760 987 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 CCL23P55773 120 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 MFSD10Q14728 455 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 SHHQ15465 462 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 PFKFB3Q16875 520 aaPredicted RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 HSDL1Q3SXM5 330 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 CELF3Q5SZQ8 465 aaKnown RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 TMEM199Q8N511 208 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 C7orf31Q8N865 590 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 PPTC7Q8NI37 304 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 CCDC12Q8WUD4 166 aaPredicted RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 EMID1Q96A84 441 aaPredicted RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 INPP4AQ96PE3 977 aaPredicted RBP9.64□□□□□ -0.87
USP16-202ENST00000399973 ANO3Q9BYT9 981 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 AGXT2Q9BYV1 514 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 TM6SF1Q9BZW5 370 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 RIC8AQ9NPQ8 531 aa9.64□□□□□ -0.87
USP16-202ENST00000399973 KAT6AQ92794 2004 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 F2P00734 622 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 SUPT20HL2P0C7V6 817 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 ACRP10323 421 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 CSF2RAP15509 400 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 SP2Q02086 613 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 PPIGQ13427 754 aaKnown RBP eCLIP9.63□□□□□ -0.87
USP16-202ENST00000399973 MTMR1Q13613 665 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 NEDD9Q14511 834 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 KIAA0753Q2KHM9 967 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 UTP14CQ5TAP6 766 aaKnown RBP9.63□□□□□ -0.87
USP16-202ENST00000399973 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 JAKMIP3Q5VZ66 844 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 MFSD5Q6N075 450 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 XRRA1Q6P2D8 792 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 REXO1Q8N1G1 1221 aaKnown RBP9.63□□□□□ -0.87
USP16-202ENST00000399973 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 NOC4LQ9BVI4 516 aaKnown RBP9.63□□□□□ -0.87
USP16-202ENST00000399973 KATNAL1Q9BW62 490 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 RNF26Q9BY78 433 aaPredicted RBP9.63□□□□□ -0.87
USP16-202ENST00000399973 SEZ6LQ9BYH1 1024 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 BCAS3Q9H6U6 928 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 VPS54Q9P1Q0 977 aa9.63□□□□□ -0.87
USP16-202ENST00000399973 WDR81Q562E7 1941 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 SIP14410 1827 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 PRPF3O43395 683 aaKnown RBP9.62□□□□□ -0.87
USP16-202ENST00000399973 EIF5BO60841 1220 aaKnown RBP9.62□□□□□ -0.87
USP16-202ENST00000399973 LGALS2P05162 132 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 TGFB3P10600 412 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 IFNAR1P17181 557 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 ICAM3P32942 547 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 ZNF76P36508 570 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 PTGISQ16647 500 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 LRIT3Q3SXY7 679 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms