RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TBC1D1Q86TI0 1168 aaPredicted RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 ADSSL1Q8N142 457 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 MDM1Q8TC05 714 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 TRIM31Q9BZY9 425 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 EPHB6O15197 1021 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 USP17L8P0C7I0 530 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 EEF1GP26641 437 aaKnown RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 ENAHQ8N8S7 591 aaPredicted RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 ZNF507Q8TCN5 953 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 NSUN4Q96CB9 384 aaKnown RBP18.8■□□□□ 0.6
PTPRA-205ENST00000399903 MTMR8Q96EF0 704 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 LEMD3Q9Y2U8 911 aa18.8■□□□□ 0.6
PTPRA-205ENST00000399903 SRGNP10124 158 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 FAM133BQ5BKY9 247 aaKnown RBP18.79■□□□□ 0.6
PTPRA-205ENST00000399903 ANKRD20A8PQ5CZ79 823 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 CAVIN3Q969G5 261 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 SLC1A4P43007 532 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 PDE4DQ08499 809 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 ARFGAP2Q8N6H7 521 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 NOX5Q96PH1 765 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 GOLPH3Q9H4A6 298 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 KIF9Q9HAQ2 790 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 PDS5AQ29RF7 1337 aaKnown RBP18.79■□□□□ 0.6
PTPRA-205ENST00000399903 PNPLA7Q6ZV29 1317 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 A0A1W2PQC6 194 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 VEGFAP15692 232 aaPredicted RBP18.79■□□□□ 0.6
PTPRA-205ENST00000399903 GNAT2P19087 354 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 ASIC1P78348 528 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 ITGB3BPQ13352 177 aaPredicted RBP18.79■□□□□ 0.6
PTPRA-205ENST00000399903 TLR10Q9BXR5 811 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
PTPRA-205ENST00000399903 TLDC2A0PJX2 215 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 IFFO1Q0D2I5 559 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 IL17AQ16552 155 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 MEA1Q16626 185 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 DZIP1Q86YF9 867 aaKnown RBP18.78■□□□□ 0.6
PTPRA-205ENST00000399903 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 NSMCE1Q8WV22 266 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 ACTR5Q9H9F9 607 aaPredicted RBP18.78■□□□□ 0.6
PTPRA-205ENST00000399903 RASSF10A6NK89 507 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 HMGB1P1B2RPK0 211 aaPredicted RBP18.78■□□□□ 0.6
PTPRA-205ENST00000399903 TM4SF1P30408 202 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 CRYMQ14894 314 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 GKAP1Q5VSY0 366 aaPredicted RBP18.78■□□□□ 0.6
PTPRA-205ENST00000399903 FBXO33Q7Z6M2 555 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 ESR2Q92731 530 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 NUP58Q9BVL2 599 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
PTPRA-205ENST00000399903 LRRC53A6NM62 1247 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 PALMO75781 387 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 UPP2O95045 317 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 MYBL1P10243 752 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 CALRP27797 417 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 KRT71Q3SY84 523 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 ANKRD40Q6AI12 368 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 PIK3R5Q8WYR1 880 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 SELENOSQ9BQE4 189 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 PLCD4Q9BRC7 762 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 AP1M1Q9BXS5 423 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 BAZ2AQ9UIF9 1905 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 DCDC2CA8MYV0 355 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 ADAMTS3O15072 1205 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 RAD51CO43502 376 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 MAGOHP61326 146 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 YTHDF3Q7Z739 585 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 CCDC155Q8N6L0 562 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 SLC44A5Q8NCS7 719 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 RNF217Q8TC41 542 aa18.77■□□□□ 0.6
PTPRA-205ENST00000399903 MAGOHBQ96A72 148 aaKnown RBP18.77■□□□□ 0.6
PTPRA-205ENST00000399903 AFF2P51816 1311 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 FCER1AP12319 257 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 WLSQ5T9L3 541 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 CHADLQ6NUI6 762 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 DNAAF5Q86Y56 855 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.59
PTPRA-205ENST00000399903 CCDC113Q9H0I3 377 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 NOD2Q9HC29 1040 aa18.77■□□□□ 0.59
PTPRA-205ENST00000399903 WNK3Q9BYP7 1800 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 SLC8A1P32418 973 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 GOPCQ9HD26 462 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 RTL9Q8NET4 1388 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 BMP15O95972 392 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 ATP2C1P98194 919 aaPredicted RBP18.76■□□□□ 0.59
PTPRA-205ENST00000399903 PKN1Q16512 942 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 RAPGEF5Q92565 580 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 RNF41Q9H4P4 317 aaPredicted RBP18.76■□□□□ 0.59
PTPRA-205ENST00000399903 LRP5O75197 1615 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 TRIM37O94972 964 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 HSPA1LP34931 641 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 TAF4BQ92750 862 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms