RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 FCER1AP12319 257 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 KRT15P19012 456 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 PMLP29590 882 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 DPYDQ12882 1025 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 NBNO60934 754 aa11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-216ENST00000399638 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 CHMLP26374 656 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 SLC16A2P36021 539 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 TSC1Q92574 1164 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 HAUS8Q9BT25 410 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 KCNJ14Q9UNX9 436 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 A6NNZ2 444 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 TUBB8Q3ZCM7 444 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 FLCNQ8NFG4 579 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 TMEM63CQ9P1W3 806 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 PEX19P40855 299 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 CMTR1Q8N1G2 835 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 HMGB1P1B2RPK0 211 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 MYBP10242 640 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 ABCB4P21439 1286 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 TTC23LQ6PF05 361 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 FGD4Q96M96 766 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 POLR2DO15514 142 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 CYBBP04839 570 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 OR6J1Q8NGC5 347 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-216ENST00000399638 CYP2B6P20813 491 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 SYDE2Q5VT97 1194 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ARMC6Q6NXE6 501 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 IFNKQ9P0W0 207 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 BMP3P12645 472 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ASZ1Q8WWH4 475 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ECE2O60344 883 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 DAB2P98082 770 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 KRBA2Q6ZNG9 492 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ERBB3P21860 1342 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 PRRG1O14668 218 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 TTLL1O95922 423 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 BPIFB4P59827 614 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 PAK1Q13153 545 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 DNAAF3Q8N9W5 541 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ASIC4Q96FT7 647 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 CEP19Q96LK0 163 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 AMNQ9BXJ7 453 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 EIF2AK2P19525 551 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 MXD4Q14582 209 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 NEUROG2Q9H2A3 272 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
CACNA1C-216ENST00000399638 ABCC4O15439 1325 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 SEMA3EO15041 775 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 VAV2P52735 878 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 GJC2Q5T442 439 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 TMEM247A6NEH6 219 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 IRAK1BP1Q5VVH5 260 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 FRA10AC1Q70Z53 315 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 NLRP9Q7RTR0 991 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 PRR23AA6NEV1 266 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 PRPF4O43172 522 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 MYL5Q02045 173 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 ARL13BQ3SXY8 428 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 MAIP1Q8WWC4 291 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 CCDC17Q96LX7 622 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 CARD14Q9BXL6 1004 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 GNGT2O14610 69 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms