RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 HOXA13P31271 388 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 PHKA2P46019 1235 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 PAK2Q13177 524 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 CD58P19256 250 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 KCNK3O14649 394 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 VEPH1Q14D04 833 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 CDC26Q8NHZ8 85 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 PIGBQ92521 554 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 TDRD3Q9H7E2 651 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 FGAP02671 866 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 TROVE2P10155 538 aaKnown RBP eCLIP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 IL1RL1Q01638 556 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 MECOMQ03112 1051 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ARHGEF18Q6ZSZ5 1173 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 SUDS3Q9H7L9 328 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 CARMIL3Q8ND23 1372 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 DCAF4Q8WV16 495 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 HACD3Q9P035 362 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 PMLP29590 882 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 MYSM1Q5VVJ2 828 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 UBE2SQ16763 222 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 PTPROQ16827 1216 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 ANKRD20A3Q5VUR7 823 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 KRIT1O00522 736 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 COPB2P35606 906 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 JAK3P52333 1124 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 ARHGAP4P98171 946 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 ADCY9O60503 1353 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 CPB1P15086 417 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 CACNB3P54284 484 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 MTX1Q13505 466 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
CACNA1C-213ENST00000399629 MYOM2P54296 1465 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 PRPSAP2O60256 369 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 CDK8P49336 464 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 SUSD4Q5VX71 490 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 BEST2Q8NFU1 509 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.31
CACNA1C-213ENST00000399629 K7ERI5 159 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 BUB1O43683 1085 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 SLFN12LQ6IEE8 588 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 SDCCAG3Q96C92 435 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 PTGDRQ13258 359 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 GPATCH11Q8N954 259 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 BBOF1Q8ND07 529 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 DOLKQ9UPQ8 538 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 MCF2LO15068 1137 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 CPP00450 1065 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 MAPK4P31152 587 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 EVCP57679 992 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 PDE1BQ01064 536 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 KIAA1755Q5JYT7 1200 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 DNAJC24Q6P3W2 148 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 GDAQ9Y2T3 454 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 ESRRBO95718 433 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 DDIT3P35638 169 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 PHLPP2Q6ZVD8 1323 aa13.08□□□□□ -0.32
CACNA1C-213ENST00000399629 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
CACNA1C-213ENST00000399629 CLIC2O15247 247 aa13.07□□□□□ -0.32
CACNA1C-213ENST00000399629 HUS1O60921 280 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms