RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 SLX4Q8IY92 1834 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 POTEB3A0JP26 581 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 SPDYE3A6NKU9 549 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 POTECB2RU33 542 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 EIF3CLB5ME19 914 aaKnown RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 E9PMD0 336 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 KRT86O43790 486 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 GH2P01242 217 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 PLA2G4BP0C869 781 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 BMP3P12645 472 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 WHAMMP3Q1A5X7 153 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CCDC122Q5T0U0 273 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 SYDE2Q5VT97 1194 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 POTEBQ6S5H4 581 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 KIAA1328Q86T90 577 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 EIF3CQ99613 913 aaKnown RBP15.38■□□□□ 0.05
PRAME-202ENST00000398743 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 TRIM10Q9UDY6 481 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 SIK3Q9Y2K2 1263 aa15.38■□□□□ 0.05
PRAME-202ENST00000398743 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
PRAME-202ENST00000398743 USH1GQ495M9 461 aa15.37■□□□□ 0.05
PRAME-202ENST00000398743 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
PRAME-202ENST00000398743 UIMC1Q96RL1 719 aa15.37■□□□□ 0.05
PRAME-202ENST00000398743 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
PRAME-202ENST00000398743 PSMD14O00487 310 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 TBX3O15119 743 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 FOSP01100 380 aaPredicted RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 SNAP25P60880 206 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 Q4G0T1 1027 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 ZCWPW2Q504Y3 356 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 PRR16Q569H4 304 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 ETNPPLQ8TBG4 499 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 PRMT6Q96LA8 375 aaPredicted RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 PLAGL2Q9UPG8 496 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 PPIP5K2O43314 1243 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 ATP8B1O43520 1251 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 HNRNPH3P31942 346 aaKnown RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 STAT3P40763 770 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 AMPD2Q01433 879 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 GPBP1Q86WP2 473 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 ERMNQ8TAM6 284 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 JAKMIP2Q96AA8 810 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 P2RX7Q99572 595 aaKnown RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 FAM207AQ9NSI2 230 aaPredicted RBP15.36■□□□□ 0.05
PRAME-202ENST00000398743 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
PRAME-202ENST00000398743 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 MED24O75448 989 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
PRAME-202ENST00000398743 KIF20AO95235 890 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 CYP11B2P19099 503 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 SREBF1P36956 1147 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 MMP14P50281 582 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 JAG1P78504 1218 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
PRAME-202ENST00000398743 DMTNQ08495 405 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 CCDC42Q96M95 316 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 ARFGAP3Q9NP61 516 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 HERC5Q9UII4 1024 aaKnown RBP15.35■□□□□ 0.05
PRAME-202ENST00000398743 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
PRAME-202ENST00000398743 CTAGE15A4D2H0 777 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 YDJCA8MPS7 323 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 TRAF5O00463 557 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 CTAGE8P0CG41 777 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 SPIRE1Q08AE8 756 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 HERC4Q5GLZ8 1057 aaPredicted RBP15.35■□□□□ 0.05
PRAME-202ENST00000398743 CTAGE6Q86UF2 777 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 CTAGE4Q8IX94 777 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 PCDHA2Q9Y5H9 948 aa15.35■□□□□ 0.05
PRAME-202ENST00000398743 PITPNM2Q9BZ72 1349 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 CCDC151A5D8V7 595 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 EPHB6O15197 1021 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 KRT18P05783 430 aaKnown RBP15.34■□□□□ 0.05
PRAME-202ENST00000398743 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 SLC12A3P55017 1021 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 POTEEQ6S8J3 1075 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 LENG9Q96B70 501 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 CEP63Q96MT8 703 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 TANGO6Q9C0B7 1094 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRAME-202ENST00000398743 TBC1D7Q9P0N9 293 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 NPHP3-ACAD11A0A0J9YXS1 232 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 A0A1W2PRG0 241 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms