RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 NFKBIEO00221 500 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 TBX3O15119 743 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 CCDC42Q96M95 316 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 NUP58Q9BVL2 599 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 BHMT2Q9H2M3 363 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 CICQ96RK0 1608 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 LAMB4A4D0S4 1761 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 PSMD2Q13200 908 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 CTTNQ14247 550 aaKnown RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 VWA3BQ502W6 1294 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 TRPM4Q8TD43 1214 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 RIOX1Q9H6W3 641 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 METTL14Q9HCE5 456 aaKnown RBP9.15□□□□□ -0.94
PTPRD-204ENST00000397606 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
PTPRD-204ENST00000397606 ERLIN2O94905 339 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.95
PTPRD-204ENST00000397606 NR3C2P08235 984 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 SKILP12757 684 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 PDIA5Q14554 519 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 DHTKD1Q96HY7 919 aaPredicted RBP9.15□□□□□ -0.95
PTPRD-204ENST00000397606 PARVGQ9HBI0 331 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.95
PTPRD-204ENST00000397606 ZDHHC9Q9Y397 364 aa9.15□□□□□ -0.95
PTPRD-204ENST00000397606 LONRF3Q496Y0 759 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 SYNCQ9H7C4 482 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ARMCX3Q9UH62 379 aaPredicted RBP9.14□□□□□ -0.95
PTPRD-204ENST00000397606 CEP83Q9Y592 693 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 PCDHAC2Q9Y5I4 1007 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 AK9Q5TCS8 1911 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 MAFGO15525 162 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 XRCC5P13010 732 aaKnown RBP9.14□□□□□ -0.95
PTPRD-204ENST00000397606 QARSP47897 775 aaKnown RBP9.14□□□□□ -0.95
PTPRD-204ENST00000397606 RAPGEF1Q13905 1077 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 SPATA1Q5VX52 437 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ARMCX5Q6P1M9 558 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 IGSF22Q8N9C0 903 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 MCPH1Q8NEM0 835 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 MKL1Q969V6 931 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 AKT3Q9Y243 479 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ZNF541Q9H0D2 1346 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ARFGEF2Q9Y6D5 1785 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 DDIT3P35638 169 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 NOP2P46087 812 aaKnown RBP9.14□□□□□ -0.95
PTPRD-204ENST00000397606 KRT83P78385 493 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ARID5AQ03989 594 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 MORC3Q14149 939 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ZNF658Q5TYW1 1059 aaPredicted RBP9.14□□□□□ -0.95
PTPRD-204ENST00000397606 CLEC17AQ6ZS10 378 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 IQCDQ96DY2 449 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 PAGE5Q96GU1 130 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 TMEM206Q9H813 350 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 KMT5AQ9NQR1 393 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 CYP2J2P51589 502 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 ALCAMQ13740 583 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 MROH8Q9H579 483 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 PCDHA10Q9Y5I2 948 aa9.14□□□□□ -0.95
PTPRD-204ENST00000397606 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 HNRNPDLO14979 420 aaKnown RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 PTPRAP18433 802 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 PSMC5P62195 406 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 MSANTD4Q8NCY6 345 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 KIF18AQ8NI77 898 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 TNNI1P19237 187 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 RPS6P62753 249 aaKnown RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 FKBP1BP68106 108 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 ADAM9Q13443 819 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 EPHA7Q15375 998 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 PAF1Q8N7H5 531 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 ACCSQ96QU6 501 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 MANSC4A6NHS7 340 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 GNAT1P11488 350 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 ZNF280AP59817 542 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 NTRK3Q16288 839 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 TCP11Q8WWU5 503 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 KIFAP3Q92845 792 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 ZNF302Q9NR11 478 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 TRMT1Q9NXH9 659 aaKnown RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 XIRP1Q702N8 1843 aaKnown RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 INO80B-WBP1J3KQ70 363 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 STAM2O75886 525 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 INO80BQ9C086 356 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 JPH1Q9HDC5 661 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-204ENST00000397606 SLC9A2Q9UBY0 812 aa9.13□□□□□ -0.95
PTPRD-204ENST00000397606 KCNJ18B7U540 433 aa9.12□□□□□ -0.95
PTPRD-204ENST00000397606 FZD9O00144 591 aa9.12□□□□□ -0.95
PTPRD-204ENST00000397606 N4BP1O75113 896 aaKnown RBP9.12□□□□□ -0.95
PTPRD-204ENST00000397606 TXNP10599 105 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms