RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 MIER1Q8N108 512 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
SEC13-206ENST00000397102 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 ATG2AQ2TAZ0 1938 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 RSPH10B2B2RC85 870 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 EIF3JO75822 258 aaKnown RBP17.51■□□□□ 0.39
SEC13-206ENST00000397102 RSPH10BP0C881 870 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 PCP11498 1178 aaKnown RBP17.51■□□□□ 0.39
SEC13-206ENST00000397102 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
SEC13-206ENST00000397102 GPM6BQ13491 265 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 PLEKHG4Q58EX7 1191 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 TCEAL5Q5H9L2 206 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 DHX37Q8IY37 1157 aaKnown RBP17.51■□□□□ 0.39
SEC13-206ENST00000397102 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 NSUN3Q9H649 340 aaKnown RBP17.51■□□□□ 0.39
SEC13-206ENST00000397102 ZNF318Q5VUA4 2279 aa17.51■□□□□ 0.39
SEC13-206ENST00000397102 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 HIC1Q14526 733 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 ADHFE1Q8IWW8 467 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 YME1L1Q96TA2 773 aa17.5■□□□□ 0.39
SEC13-206ENST00000397102 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 NR3C2P08235 984 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 EIF2AK2P19525 551 aaKnown RBP17.49■□□□□ 0.39
SEC13-206ENST00000397102 THPOP40225 353 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 MFSD6Q6ZSS7 791 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 EP400NLQ6ZTU2 488 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 FBXO11Q86XK2 927 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 TMEM192Q8IY95 271 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
SEC13-206ENST00000397102 PXMP2Q9NR77 195 aa17.49■□□□□ 0.39
SEC13-206ENST00000397102 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
SEC13-206ENST00000397102 SALL3Q9BXA9 1300 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 HSPD1P10809 573 aaKnown RBP17.48■□□□□ 0.39
SEC13-206ENST00000397102 HAND2P61296 217 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 MCMDC2Q4G0Z9 681 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 DGKHQ86XP1 1220 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 ADGRF4Q8IZF3 695 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 SEPT8Q92599 483 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 CLDND1Q9NY35 253 aa17.48■□□□□ 0.39
SEC13-206ENST00000397102 NCK2O43639 380 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 IRS1P35568 1242 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 KCNV1Q6PIU1 500 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 HFE2Q6ZVN8 426 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
SEC13-206ENST00000397102 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 C17orf102A2RUQ5 167 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 CAND2O75155 1236 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 UPP2O95045 317 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 HOXC8P31273 242 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 CELF3Q5SZQ8 465 aaKnown RBP17.46■□□□□ 0.39
SEC13-206ENST00000397102 RPAINQ86UA6 219 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 TBC1D10CQ8IV04 446 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 ESR2Q92731 530 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 FAM227BQ96M60 508 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 SPATA33Q96N06 139 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 ZKSCAN3Q9BRR0 538 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 RNF41Q9H4P4 317 aaPredicted RBP17.46■□□□□ 0.39
SEC13-206ENST00000397102 LAMA4Q16363 1823 aa17.46■□□□□ 0.39
SEC13-206ENST00000397102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
SEC13-206ENST00000397102 RGS20O76081 388 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 GGPS1O95749 300 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 CFBP00751 764 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 LTBRP36941 435 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 NT5C2P49902 561 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 HSD17B4P51659 736 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 GHRHRQ02643 423 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
SEC13-206ENST00000397102 CTC1Q2NKJ3 1217 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
SEC13-206ENST00000397102 PDCD2LQ9BRP1 358 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 MYO7AQ13402 2215 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 NEDD4P46934 1319 aa17.45■□□□□ 0.38
SEC13-206ENST00000397102 C5orf67F2Z3F1 127 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 HERC4Q5GLZ8 1057 aaPredicted RBP17.44■□□□□ 0.38
SEC13-206ENST00000397102 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
SEC13-206ENST00000397102 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 APBB2Q92870 758 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
SEC13-206ENST00000397102 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
SEC13-206ENST00000397102 MAP3K20Q9NYL2 800 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms