RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PDHBP11177 359 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 BLOC1S2Q6QNY1 142 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 TBC1D10CQ8IV04 446 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 NCOA7Q8NI08 942 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 AFG1LQ8WV93 481 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 KCNB2Q92953 911 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 EMID1Q96A84 441 aaPredicted RBP15.84■□□□□ 0.13
SEC13-205ENST00000397101 TTC14Q96N46 770 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 SAMD11Q96NU1 681 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 TMEM47Q9BQJ4 181 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 KRT23Q9C075 422 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 CNNM2Q9H8M5 875 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 INSL6Q9Y581 213 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 TRIP12Q14669 1992 aaPredicted RBP15.84■□□□□ 0.13
SEC13-205ENST00000397101 POTEB3A0JP26 581 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 KCNA5P22460 613 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 FGD1P98174 961 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 ARHGAP1Q07960 439 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 PTK7Q13308 1070 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 DGKDQ16760 1214 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 ADCK5Q3MIX3 580 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 TSGA10IPQ3SY00 556 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 PTCRAQ6ISU1 281 aaPredicted RBP15.83■□□□□ 0.12
SEC13-205ENST00000397101 TRAF7Q6Q0C0 670 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 POTEBQ6S5H4 581 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
SEC13-205ENST00000397101 PPP1R13LQ8WUF5 828 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 MRPL38Q96DV4 380 aaKnown RBP15.83■□□□□ 0.12
SEC13-205ENST00000397101 IWS1Q96ST2 819 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 MTMR7Q9Y216 660 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 CYP46A1Q9Y6A2 500 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
SEC13-205ENST00000397101 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
SEC13-205ENST00000397101 IL9P15248 144 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 HTRA4P83105 476 aaPredicted RBP15.82■□□□□ 0.12
SEC13-205ENST00000397101 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
SEC13-205ENST00000397101 COL19A1Q14993 1142 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 RABEP1Q15276 862 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 PTPROQ16827 1216 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
SEC13-205ENST00000397101 TIGD5Q53EQ6 642 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 TMCO2Q7Z6W1 182 aaPredicted RBP15.82■□□□□ 0.12
SEC13-205ENST00000397101 PRKAG3Q9UGI9 489 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 FAM50BQ9Y247 325 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 SIP14410 1827 aa15.82■□□□□ 0.12
SEC13-205ENST00000397101 B4E1Z4 1266 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 HAS3O00219 553 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 DCXO43602 365 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 F2P00734 622 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 SSTR3P32745 418 aaPredicted RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 NEDD4P46934 1319 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 NEK4P51957 841 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 TCTN1Q2MV58 587 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 GPATCH4Q5T3I0 446 aaKnown RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 FRMPD2Q68DX3 1309 aaPredicted RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 STOX1Q6ZVD7 989 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 EMSYQ7Z589 1322 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 C7orf31Q8N865 590 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 NSUN6Q8TEA1 469 aaKnown RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 ESR2Q92731 530 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
SEC13-205ENST00000397101 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 HDAC6Q9UBN7 1215 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 MTUS1Q9ULD2 1270 aa15.81■□□□□ 0.12
SEC13-205ENST00000397101 KDM4AO75164 1064 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 LGR5O75473 907 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 HOXD8P13378 290 aaPredicted RBP15.8■□□□□ 0.12
SEC13-205ENST00000397101 CPA1P15085 419 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 NT5C2P49902 561 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 MRE11P49959 708 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 LAMC2Q13753 1193 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 STXBP2Q15833 593 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 LY6KQ17RY6 165 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
SEC13-205ENST00000397101 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 PDRG1Q9NUG6 133 aa15.8■□□□□ 0.12
SEC13-205ENST00000397101 DDX41Q9UJV9 622 aaKnown RBP15.8■□□□□ 0.12
SEC13-205ENST00000397101 COL4A6Q14031 1691 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 ERICH2A1L162 156 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 ST18O60284 1047 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 AMHP03971 560 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 MCM5P33992 734 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 ANP32AP39687 249 aaKnown RBP15.79■□□□□ 0.12
SEC13-205ENST00000397101 PSEN2P49810 448 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 NHLH1Q02575 133 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 MBTPS1Q14703 1052 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 ZNF618Q5T7W0 954 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 RUFY3Q7L099 469 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 DHX32Q7L7V1 743 aaKnown RBP15.79■□□□□ 0.12
SEC13-205ENST00000397101 CHST3Q7LGC8 479 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 MCF2L2Q86YR7 1114 aa15.79■□□□□ 0.12
SEC13-205ENST00000397101 PPTC7Q8NI37 304 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms