RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 STAT6P42226 847 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 DPCR1Q3MIW9 517 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 NSMFQ6X4W1 530 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 VSIG10LQ86VR7 867 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 PLA2G4DQ86XP0 818 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 FAM200AQ8TCP9 573 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
TRIM39-204ENST00000396548 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
TRIM39-204ENST00000396548 ZNFX1Q9P2E3 1918 aaKnown RBP14.31□□□□□ -0.12
TRIM39-204ENST00000396548 CASP1P29466 404 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 PLS1Q14651 629 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 UVSSAQ2YD98 709 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 WDR11Q9BZH6 1224 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 CBX8Q9HC52 389 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 ANO10Q9NW15 660 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
TRIM39-204ENST00000396548 KIF3CO14782 793 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 ZNF76P36508 570 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 RNF214Q8ND24 703 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
TRIM39-204ENST00000396548 FBXO40Q9UH90 709 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 PLXNB2O15031 1838 aa14.31□□□□□ -0.12
TRIM39-204ENST00000396548 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-204ENST00000396548 RGS20O76081 388 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 SPATA31C1P0DKV0 1188 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 EIF2AK2P19525 551 aaKnown RBP14.3□□□□□ -0.12
TRIM39-204ENST00000396548 CUL4BQ13620 913 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 RASAL3Q86YV0 1011 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 DHX40Q8IX18 779 aaKnown RBP14.3□□□□□ -0.12
TRIM39-204ENST00000396548 PFASO15067 1338 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 PDHXO00330 501 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 EML1O00423 815 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 SLC25A27O95847 323 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 AFMP43652 599 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 CCL15Q16663 113 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 CNNM4Q6P4Q7 775 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 SAPCD2Q86UD0 394 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
TRIM39-204ENST00000396548 KCNH7Q9NS40 1196 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 STK17AQ9UEE5 414 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 WDR81Q562E7 1941 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 KLRC4O43908 158 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 MED24O75448 989 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 MYL1P05976 194 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 CYP2C8P10632 490 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 SNX29Q8TEQ0 813 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 GTF3C2Q8WUA4 911 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-204ENST00000396548 FGD4Q96M96 766 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 PLIN2Q99541 437 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 RIT2Q99578 217 aa14.3□□□□□ -0.12
TRIM39-204ENST00000396548 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-204ENST00000396548 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 KRT79Q5XKE5 535 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
TRIM39-204ENST00000396548 STAMQ92783 540 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 DNAJC25-GNG10A0A024R161 153 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 BIN1O00499 593 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 NR3C2P08235 984 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 ERCC3P19447 782 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 EDNRBP24530 442 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 COPB2P35606 906 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 FAM133AQ8N9E0 248 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 SHCBP1Q8NEM2 672 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 RAD54LQ92698 747 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 INPP4AQ96PE3 977 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-204ENST00000396548 HSD17B14Q9BPX1 270 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 ZNF577Q9BSK1 485 aa14.29□□□□□ -0.12
TRIM39-204ENST00000396548 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-204ENST00000396548 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 AP5Z1O43299 807 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 RPA1P27694 616 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 ZNF165P49910 485 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 ERVK-24P63145 666 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 CATSPER3Q86XQ3 398 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 MORF4L1Q9UBU8 362 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 ADGRA2Q96PE1 1338 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 KDM3AQ9Y4C1 1321 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 SOWAHBA6NEL2 793 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 FAM155AB1AL88 458 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-204ENST00000396548 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
TRIM39-204ENST00000396548 CCND2P30279 289 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 HUNKP57058 714 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 MKRN3Q13064 507 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms