RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 KRT37O76014 449 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 PDGFBP01127 241 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 ICAM3P32942 547 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 BMPR1AP36894 532 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 NOVP48745 357 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 CHMP4BP1P59074 171 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 PDE4DQ08499 809 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 BTNL9Q6UXG8 535 aa16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
VCPKMT-201ENST00000395859 MMP1P03956 469 aa16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 PSEN2P49810 448 aa16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 PDE4BQ07343 736 aa16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 SERINC5Q86VE9 423 aa16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 EMID1Q96A84 441 aaPredicted RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 C11orf84Q9BUA3 381 aaPredicted RBP16.22■□□□□ 0.19
VCPKMT-201ENST00000395859 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 RSPH10B2B2RC85 870 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 GH1P01241 217 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 RSPH10BP0C881 870 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 CALML3P27482 149 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 HOXC8P31273 242 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 CTNNB1P35222 781 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 LY6KQ17RY6 165 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 CLASRPQ8N2M8 674 aaKnown RBP16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 C7orf31Q8N865 590 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 RIPOR3Q96MK2 946 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 PHF7Q9BWX1 381 aaPredicted RBP16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
VCPKMT-201ENST00000395859 KIAA1217Q5T5P2 1943 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 UPP2O95045 317 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 GLP2RO95838 553 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 MFSD10Q14728 455 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 DGKDQ16760 1214 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 PTPN21Q16825 1174 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 KIAA0753Q2KHM9 967 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 RNF207Q6ZRF8 634 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 EFHBQ8N7U6 833 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 SUSD6Q92537 303 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 KIF1BPQ96EK5 621 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 IGFLR1Q9H665 355 aa16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 USP15Q9Y4E8 981 aaPredicted RBP16.2■□□□□ 0.18
VCPKMT-201ENST00000395859 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 RLBP1P12271 317 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 TFAP4Q01664 338 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 FIBCD1Q8N539 461 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 KATNAL1Q9BW62 490 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-201ENST00000395859 ATF7P17544 494 aaPredicted RBP16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 DNAJB1P25685 340 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 THPOP40225 353 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 NDUFV1P49821 464 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 ADSSL1Q8N142 457 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 TMEM105Q8N8V8 129 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 SEPT8Q92599 483 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 NKD2Q969F2 451 aaPredicted RBP16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 ALG1Q9BT22 464 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 PLVAPQ9BX97 442 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 RWDD3Q9Y3V2 267 aa16.18■□□□□ 0.18
VCPKMT-201ENST00000395859 ZNF286BP0CG31 522 aa16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 SLC16A2P36021 539 aa16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 MPHOSPH6Q99547 160 aaKnown RBP16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 ADGRA3Q8IWK6 1321 aa16.17■□□□□ 0.18
VCPKMT-201ENST00000395859 BAHCC1Q9P281 2608 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 TTC3P53804 2025 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 CHD8Q9HCK8 2581 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 KDM4AO75164 1064 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 DCAF4Q8WV16 495 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 P2RX5Q93086 422 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 RMDN1Q96DB5 314 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 BARX2Q9UMQ3 279 aaPredicted RBP16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
VCPKMT-201ENST00000395859 GPAA1O43292 621 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 NMT2O60551 498 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms