RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 EIF3CLB5ME19 914 aaKnown RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 F5H6K3 240 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 MEIS2O14770 477 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 KLRC3Q07444 240 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 DMTNQ08495 405 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 COASYQ13057 564 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 LRRC55Q6ZSA7 311 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 EIF3CQ99613 913 aaKnown RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 PARD6BQ9BYG5 372 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 NHEJ1Q9H9Q4 299 aaPredicted RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 PSMD14O00487 310 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 NKRFO15226 690 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAE1-203ENST00000395841 ENTPD3O75355 529 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 CCDC84Q86UT8 332 aaPredicted RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 TTLL6Q8N841 843 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 CRYGNQ8WXF5 182 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 PANK4Q9NVE7 773 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 PUF60Q9UHX1 559 aaKnown RBP12.53□□□□□ -0.4
RAE1-203ENST00000395841 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
RAE1-203ENST00000395841 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.4
RAE1-203ENST00000395841 GDF11O95390 407 aa12.52□□□□□ -0.4
RAE1-203ENST00000395841 HNRNPH3P31942 346 aaKnown RBP12.52□□□□□ -0.4
RAE1-203ENST00000395841 CCDC122Q5T0U0 273 aa12.52□□□□□ -0.4
RAE1-203ENST00000395841 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.4
RAE1-203ENST00000395841 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.4
RAE1-203ENST00000395841 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.4
RAE1-203ENST00000395841 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.4
RAE1-203ENST00000395841 COL4A5P29400 1685 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 KRT86O43790 486 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 NDUFB10O96000 172 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 ARHGAP4P98171 946 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 AMPD2Q01433 879 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 LRRC41Q15345 812 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 FAM26FQ5R3K3 315 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 KIAA1328Q86T90 577 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 ZSWIM4Q9H7M6 989 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 MYO6Q9UM54 1294 aa12.52□□□□□ -0.41
RAE1-203ENST00000395841 COL2A1P02458 1487 aaPredicted RBP12.52□□□□□ -0.41
RAE1-203ENST00000395841 CLRN2A0PK11 232 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 E9PMD0 336 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 TBX3O15119 743 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAE1-203ENST00000395841 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 SYDE2Q5VT97 1194 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 PRMT6Q96LA8 375 aaPredicted RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 POTECB2RU33 542 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 SEC31AO94979 1220 aaKnown RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 FOSP01100 380 aaPredicted RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 MMP14P50281 582 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
RAE1-203ENST00000395841 Q4G0T1 1027 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 ETNPPLQ8TBG4 499 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 ARFGAP3Q9NP61 516 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
RAE1-203ENST00000395841 CTAGE15A4D2H0 777 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CCDC151A5D8V7 595 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 GH2P01242 217 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CTAGE8P0CG41 777 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 BMP3P12645 472 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
RAE1-203ENST00000395841 BRD3Q15059 726 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CTAGE6Q86UF2 777 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CTAGE4Q8IX94 777 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
RAE1-203ENST00000395841 ANKZF1Q9H8Y5 726 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 KIF20AO95235 890 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 CYP11B2P19099 503 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 SREBF1P36956 1147 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 STAT3P40763 770 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 SNAP25P60880 206 aa12.5□□□□□ -0.41
RAE1-203ENST00000395841 JAG1P78504 1218 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms