RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 E9PMD0 336 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 TLR2O60603 784 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 FAM228BP0C875 321 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 RASA1P20936 1047 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 KCNMA1Q12791 1236 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 TSGA10Q9BZW7 698 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 C6orf50Q9HD87 102 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 EPHB4P54760 987 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 MAN2A1Q16706 1144 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 EFCAB13Q8IY85 973 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 BAP1Q92560 729 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 NLRP3Q96P20 1036 aa16.1■□□□□ 0.17
SPECC1-202ENST00000395522 STAT3P40763 770 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 AMPD3Q01432 767 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SPECC1-202ENST00000395522 FAM83BQ5T0W9 1011 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 CASKIN2Q8WXE0 1202 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 MEIS1O00470 390 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 COPB2P35606 906 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 MMGT1Q8N4V1 131 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 C7orf25Q9BPX7 421 aa16.09■□□□□ 0.17
SPECC1-202ENST00000395522 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
SPECC1-202ENST00000395522 E7EVH7 732 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 RAD51CO43502 376 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.17
SPECC1-202ENST00000395522 TMOD1P28289 359 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 SNAP25P60880 206 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 CFAP221Q4G0U5 840 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 CENPPQ6IPU0 288 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 RETREG2Q8NC44 543 aa16.08■□□□□ 0.17
SPECC1-202ENST00000395522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.08■□□□□ 0.171e-6■■■■■ 83.3
SPECC1-202ENST00000395522 SMIM23A6NLE4 172 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 CEP104O60308 925 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 IFT88Q13099 833 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 PDXDC1Q6P996 788 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 NOC3LQ8WTT2 800 aaKnown RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 DDX47Q9H0S4 455 aaKnown RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 A0A087WUV0 522 aaPredicted RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 OPA1O60313 960 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 BTDP43251 543 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 CDK8P49336 464 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 ODF2Q5BJF6 829 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 SFMBT2Q5VUG0 894 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 HGSNATQ68CP4 663 aa16.08■□□□□ 0.16
SPECC1-202ENST00000395522 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
SPECC1-202ENST00000395522 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
SPECC1-202ENST00000395522 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 HERC4Q5GLZ8 1057 aaPredicted RBP16.07■□□□□ 0.16
SPECC1-202ENST00000395522 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 ZMYND12Q9H0C1 365 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 EFCC1Q9HA90 598 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 LRRC4CQ9HCJ2 640 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
SPECC1-202ENST00000395522 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
SPECC1-202ENST00000395522 OTUD6BQ8N6M0 293 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
SPECC1-202ENST00000395522 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 POTECB2RU33 542 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 GOLGA8KD6RF30 607 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 KIAA0754O94854 1291 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
SPECC1-202ENST00000395522 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 UHMK1Q8TAS1 419 aaKnown RBP16.06■□□□□ 0.16
SPECC1-202ENST00000395522 SHOX2O60902 331 aaPredicted RBP16.06■□□□□ 0.16
SPECC1-202ENST00000395522 SLC9A1P19634 815 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 NR1D1P20393 614 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 GNA11P29992 359 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 FLT3P36888 993 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 GNAQP50148 359 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
SPECC1-202ENST00000395522 COASYQ13057 564 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
SPECC1-202ENST00000395522 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
SPECC1-202ENST00000395522 UBLCP1Q8WVY7 318 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms