RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 EDIL3O43854 480 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
SCAF11-204ENST00000395454 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 SHCBP1Q8NEM2 672 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 TBCKQ8TEA7 893 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
SCAF11-204ENST00000395454 GOLGA6L6A8MZA4 724 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 SMC2O95347 1197 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 OR52Z1P0C646 297 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 MAPK4P31152 587 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 DPYDQ12882 1025 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 GSDMAQ96QA5 445 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAF11-204ENST00000395454 IVNS1ABPQ9Y6Y0 642 aa17.02■□□□□ 0.32
SCAF11-204ENST00000395454 NEMFO60524 1076 aa17.02■□□□□ 0.31
SCAF11-204ENST00000395454 MSNP26038 577 aaKnown RBP17.02■□□□□ 0.31
SCAF11-204ENST00000395454 HOXA13P31271 388 aaPredicted RBP17.02■□□□□ 0.31
SCAF11-204ENST00000395454 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.31
SCAF11-204ENST00000395454 MYL5Q02045 173 aa17.02■□□□□ 0.31
SCAF11-204ENST00000395454 SP3Q02447 781 aa17.02■□□□□ 0.31
SCAF11-204ENST00000395454 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.31
SCAF11-204ENST00000395454 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.31
SCAF11-204ENST00000395454 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.31
SCAF11-204ENST00000395454 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 GPR25O00155 361 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 FCER1AP12319 257 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 TXLNAP40222 546 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
SCAF11-204ENST00000395454 LACTBP83111 547 aaPredicted RBP17.01■□□□□ 0.31
SCAF11-204ENST00000395454 UBE2SQ16763 222 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 GPR142Q7Z601 462 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 MTMR9Q96QG7 549 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 MMP19Q99542 508 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 TMEM260Q9NX78 707 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
SCAF11-204ENST00000395454 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
SCAF11-204ENST00000395454 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
SCAF11-204ENST00000395454 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
SCAF11-204ENST00000395454 MEIS2O14770 477 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 POLR2MP0CAP2 368 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 SEMA3FQ13275 785 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 KCTD2Q14681 263 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 GRAMD1CQ8IYS0 662 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 MTRQ99707 1265 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 DISC1Q9NRI5 854 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
SCAF11-204ENST00000395454 CCNT1O60563 726 aaKnown RBP17■□□□□ 0.31
SCAF11-204ENST00000395454 MYL1P05976 194 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 BAATQ14032 418 aaPredicted RBP17■□□□□ 0.31
SCAF11-204ENST00000395454 LETM2Q2VYF4 491 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 MCTP2Q6DN12 878 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 SLC30A10Q6XR72 485 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 PLEKHH3Q7Z736 793 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 CYP39A1Q9NYL5 469 aa17■□□□□ 0.31
SCAF11-204ENST00000395454 PFASO15067 1338 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 PLXNB2O15031 1838 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 BRCA2P51587 3418 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-204ENST00000395454 ERCC5P28715 1186 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-204ENST00000395454 PSMC4P43686 418 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.313e-9■■■□□ 15.9
SCAF11-204ENST00000395454 HSD17B4P51659 736 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 TPM4P67936 248 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 KIF22Q14807 665 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 CUEDC2Q9H467 287 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
SCAF11-204ENST00000395454 STRNO43815 780 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 PGK2P07205 417 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 CTGFP29279 349 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 FCGRTP55899 365 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ZNF296Q8WUU4 475 aaPredicted RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 MGAMO43451 1857 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ZSWIM8A7E2V4 1837 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ADORA2AP29274 412 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 AP3B2Q13367 1082 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 SYTL5Q8TDW5 730 aaPredicted RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 PURBQ96QR8 312 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
SCAF11-204ENST00000395454 MAP3K20Q9NYL2 800 aaKnown RBP16.98■□□□□ 0.31
SCAF11-204ENST00000395454 ISM2Q6H9L7 571 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 MOXD1Q6UVY6 613 aa16.97■□□□□ 0.31
SCAF11-204ENST00000395454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCAF11-204ENST00000395454 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms